CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_chr_110238
(
Mycosphaerella graminicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_chr_110238
T389837_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_chr_110238
Zinc cluster
17
51
HGCDTCRARKVRCDERPGRCFNCERLGLICASSGT
estExt_Genewise1.C_chr_110238
Zinc cluster
68
96
RSCSACRLSKTRCSGQKPACLRCREKALS
Links
Other
Zinc cluster
family TFs
Other
Mycosphaerella graminicola
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0000629201
Ascaris lumbricoides
ALUE_0000629201
N
ANCCAN_12440
Ancylostoma caninum
ANCCAN_12440
N
ANCCEY_14894
Ancylostoma ceylanicum
ANCCEY_14894
N
ASU_00773
Ascaris suum
ASU_00773
N
CBG15730
Caenorhabditis briggsae
CBG15730
N
CBN19906
Caenorhabditis brenneri
CBN19906
N
CRE16168
Caenorhabditis remanei
CRE16168
N
EVEC_0000383901
Enterobius vermicularis
EVEC_0000383901
N
HCOI00823800
Haemonchus contortus
HCOI00823800
N
L898_g29876
Steinernema monticolum
L898_g29876
N
nhr-80
Caenorhabditis elegans
WBGene00003670
N
OESDEN_24381
Oesophagostomum dentatum
OESDEN_24381
N
scaffold1247-EXSNAP2012.3
Pristionchus exspectatus
scaffold1247-EXSNAP2012.3
N
SVUK_0000739401
Strongylus vulgaris
SVUK_0000739401
N
TELCIR_04754
Teladorsagia circumcincta
TELCIR_04754
N