AB04837.1 (Alternaria brassicicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 AB04837.1 T390924_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
aod-5
M02602_2.00 		Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN		 PBM
Weirauch et al.(2014)
pTH8816 		0.565 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AB04837.1 Zinc cluster 62 102

Links

Other Zinc cluster family TFs
Other Alternaria brassicicola TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017891 Oryza indica BGIOSGA017891 N 0.000
OBART05G19660 Oryza barthii OBART05G19660 N 0.000
OGLUM05G20720 Oryza glumaepatula OGLUM05G20720 N 0.000
OMERI05G17210 Oryza meridionalis OMERI05G17210 N 0.000
ONIVA05G20590 Oryza nivara ONIVA05G20590 N 0.000
OPUNC05G17330 Oryza punctata OPUNC05G17330 N 0.000
ORGLA05G0171000 Oryza glaberrima ORGLA05G0171000 N 0.000
ORUFI05G20870 Oryza rufipogon ORUFI05G20870 N 0.000