CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA017891
(
Oryza indica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BGIOSGA017891
T025578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA017891-PA
BED ZF
9
40
YSCSSAKEVAYSCGYCGYALNLSSSTRNTANI
BGIOSGA017891-PA
BED ZF
73
102
PYFHSRRSWGLFRKRTRLICRKCGGRIGNA
Links
Other
BED ZF
family TFs
Other
Oryza indica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART05G19660
Oryza barthii
OBART05G19660
N
1.000
OGLUM05G20720
Oryza glumaepatula
OGLUM05G20720
N
1.000
OMERI05G17210
Oryza meridionalis
OMERI05G17210
N
1.000
ONIVA05G20590
Oryza nivara
ONIVA05G20590
N
1.000
ORGLA05G0171000
Oryza glaberrima
ORGLA05G0171000
N
1.000
ORUFI05G20870
Oryza rufipogon
ORUFI05G20870
N
1.000
OLONG_007701
Oryza longistaminata
OLONG_007701
N
0.981
OPUNC05G17330
Oryza punctata
OPUNC05G17330
N
0.923