CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC05G17330
(
Oryza punctata
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OPUNC05G17330
T027125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC05G17330.1
BED ZF
8
40
SYSSSSAKEVAYSCGYCGYALNLSSSTRNTANI
OPUNC05G17330.1
BED ZF
73
102
PYFHSRRSWGLFRKRTRLICRKCGGRIGNA
Links
Other
BED ZF
family TFs
Other
Oryza punctata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017891
Oryza indica
BGIOSGA017891
N
0.923
OBART05G19660
Oryza barthii
OBART05G19660
N
0.923
OGLUM05G20720
Oryza glumaepatula
OGLUM05G20720
N
0.923
OMERI05G17210
Oryza meridionalis
OMERI05G17210
N
0.923
ONIVA05G20590
Oryza nivara
ONIVA05G20590
N
0.923
ORGLA05G0171000
Oryza glaberrima
ORGLA05G0171000
N
0.923
ORUFI05G20870
Oryza rufipogon
ORUFI05G20870
N
0.923
OLONG_007701
Oryza longistaminata
OLONG_007701
N
0.906