CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0D07260g
(
Kluyveromyces thermotolerans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
KLTH0D07260g
T391531_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.543
0.650
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.543
0.650
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.543
0.650
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.543
0.650
RGT1
M11480_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.543
0.650
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0D07260g
Zinc cluster
33
74
RACDQCREKKTRCDFSDERPICSACQRMGKTCTFERVPMKRG
Links
Other
Zinc cluster
family TFs
Other
Kluyveromyces thermotolerans
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
13626_YKL038W
Saccharomyces paradoxus
13626_YKL038W
I
0.543
14629_YKL038W
Saccharomyces bayanus
14629_YKL038W
I
0.543
KLLA0_F25630g
Kluyveromyces lactis
KLLA0_F25630g
N
0.539
KLTH0D07260g
Lachancea thermotolerans
KLTH0D07260g
I
0.683
Kwal_8109
Kluyveromyces waltii
Kwal_8109
N
0.658
LALA0_S02e01068g
Lachancea lanzarotensis
LALA0_S02e01068g
N
0.633
NCAS_0A04750
Naumovozyma castellii
NCAS_0A04750
I
0.600
NCAS_0A12580
Naumovozyma castellii
NCAS_0A12580
N
0.542
NDAI_0K01800
Naumovozyma dairenensis
NDAI_0K01800
I
0.608
RGT1
Saccharomyces cerevisiae
YKL038W
D
0.543
Scas_Contig625.5
Saccharomyces castellii
Scas_Contig625.5
I
0.600
Scas_Contig709.65
Saccharomyces castellii
Scas_Contig709.65
N
0.542
SU7_2014
Saccharomyces arboricola
SU7_2014
I
0.544
TDEL_0B06360
Torulaspora delbrueckii
TDEL_0B06360
I
0.549