DREB1E (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA016950 T000615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.854 1.000
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.808 0.940
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.808 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.705 0.780
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.705 0.780
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.705 0.780
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.701 0.800
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.701 0.800
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.701 0.800
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.701 0.800
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.700 0.800
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.700 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA016950-PA AP2 51 102

Links

Other AP2 family TFs
Other Oryza indica TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I
ENSACAG00000001604 Anolis carolinensis ENSACAG00000001604 I
MSGN1 Bos taurus ENSBTAG00000039113 I
MSGN1 Callithrix jacchus ENSCJAG00000032633 I
MSGN1 Canis familiaris ENSCAFG00000003750 I
MSGN1 Cavia porcellus ENSCPOG00000003061 I
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I
Msgn1 Dipodomys ordii ENSDORG00000003509 I
MSGN1 Equus caballus ENSECAG00000002724 I
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I
MSGN1 Felis catus ENSFCAG00000013583 I
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I
msgn1 Gasterosteus aculeatus ENSGACG00000008864 N
msgn1 Gasterosteus aculeatus ENSGACG00000008865 N
MSGN1 Gorilla gorilla ENSGGOG00000012168 I
MSGN1 Homo sapiens ENSG00000151379 D
ENSLOCG00000017878 Lepisosteus oculatus ENSLOCG00000017878 I
MSGN1 Loxodonta africana ENSLAFG00000015319 I
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I
ENSONIG00000013311 Oreochromis niloticus ENSONIG00000013311 N
ENSPFOG00000020615 Poecilia formosa ENSPFOG00000020615 N
msgn1 Takifugu rubripes ENSTRUG00000008888 N
ENSXMAG00000020371 Xiphophorus maculatus ENSXMAG00000020371 N