Bra002159 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra002159 T000991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.807 1.000
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.724 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.724 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.724 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.704 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.695 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.682 0.776
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra002159.1-P AP2 32 83

Links

Other AP2 family TFs
Other Brassica rapa TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018694 Ailuropoda melanoleuca ENSAMEG00000018694 N 0.000
Afo_R010054 Aptenodytes forsteri Afo_R010054 N 0.000
Afo_R000657 Aptenodytes forsteri Afo_R000657 N 0.000
ENSAMXG00000017686 Astyanax mexicanus ENSAMXG00000017686 N 0.000
BGLB010770 Biomphalaria glabrata BGLB010770 N 0.000
ENSBTAP00000010868-D3 Bos grunniens ENSBTAP00000010868-D3 N 0.000
gw.66.125.1 Branchiostoma floridae gw.66.125.1 N 0.000
Brh_R003300 Buceros rhinoceros Brh_R003300 N 0.000
Brh_R012220 Buceros rhinoceros Brh_R012220 N 0.000
Brh_R008816 Buceros rhinoceros Brh_R008816 N 0.000
Aan_R011702 Calypte anna Aan_R011702 N 0.000
Aan_R013281 Calypte anna Aan_R013281 N 0.000
Cflo_07826--XP_624996.2_APIME Camponotus floridanus Cflo_07826--XP_624996.2_APIME N 0.000
Cmyd_10006710 Chelonia mydas Cmyd_10006710 N 0.000
Cmyd_10014201 Chelonia mydas Cmyd_10014201 N 0.000
CLEC007919 Cimex lectularius CLEC007919 N 0.000
CGOC_0000046201 Cylicostephanus goldi CGOC_0000046201 N 0.000
EVEC_0000948101 Enterobius vermicularis EVEC_0000948101 N 0.000
Gfo_R007594 Geospiza fortis Gfo_R007594 N 0.000
Gfo_R003038 Geospiza fortis Gfo_R003038 N 0.000
GPUH_0000232301 Gongylonema pulchrum GPUH_0000232301 N 0.000
HPLM_0000364101 Haemonchus placei HPLM_0000364101 N 0.000
HHAL003722-PA Halyomorpha halys HHAL003722-PA N 0.000
HelroG65724 Helobdella robusta HelroG65724 N 0.000
HDID_0000181401 Hymenolepis diminuta HDID_0000181401 N 0.000
ISCW015625 Ixodes scapularis ISCW015625 N 0.000
ENSMMUP00000032000 Macaca fascicularis ENSMMUP00000032000 N 0.000
ENSMMUG00000000191 Macaca mulatta ENSMMUG00000000191 N 0.000
ENSMGAG00000006142 Meleagris gallopavo ENSMGAG00000006142 N 0.000
MCOS_0000769201 Mesocestoides corti MCOS_0000769201 N 0.000
ENSMICG00000001025 Microcebus murinus ENSMICG00000001025 N 0.000
Myotis_brandtii_Onecut1_10025995 Myotis brandtii Myotis_brandtii_Onecut1_10025995 N 0.000
Ocbimv22034216m.g Octopus bimaculoides Ocbimv22034216m.g N 0.000
Ogr02782 Ophisaurus gracilis Ogr02782 N 0.000
Ogr01623 Ophisaurus gracilis Ogr01623 N 0.000
ENSOANG00000008148 Ornithorhynchus anatinus ENSOANG00000008148 N 0.000
ENSOANG00000014925 Ornithorhynchus anatinus ENSOANG00000014925 N 0.000
PEQ_0000468501 Parascaris equorum PEQ_0000468501 N 0.000
Pvit_17411 Pogona vitticeps Pvit_17411 N 0.000
Onecut3 Rattus norvegicus ENSRNOG00000059889 N 0.000
nRc.2.0.1.g06030 Romanomermis culicivorax nRc.2.0.1.g06030 N 0.000
D_00388 Schistosoma haematobium D_00388 N 0.000
SMRZ_0002529501 Schistosoma margrebowiei SMRZ_0002529501 N 0.000
SMTD_0000798901 Schistosoma mattheei SMTD_0000798901 N 0.000
SROB_0000955701 Schistosoma rodhaini SROB_0000955701 N 0.000
SMUV_0001032901 Syphacia muris SMUV_0001032901 N 0.000
TELCIR_12105 Teladorsagia circumcincta TELCIR_12105 N 0.000
TELCIR_14748 Teladorsagia circumcincta TELCIR_14748 N 0.000
ENSTNIG00000004331 Tetraodon nigroviridis ENSTNIG00000004331 N 0.000
D917_03505 Trichinella nativa D917_03505 N 0.000
EFV55313 Trichinella spiralis EFV55313 N 0.000
D918_08253 Trichuris suis D918_08253 N 0.000
Tal_R009917 Tyto alba Tal_R009917 N 0.000
Tal_R009878 Tyto alba Tal_R009878 N 0.000
L798_07539 Zootermopsis nevadensis L798_07539 N 0.000