Bra003752 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra003752 T001002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.790 0.980
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.790 0.980
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.790 0.980
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.721 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.700 0.837
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.683 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003752.1-P AP2 40 91

Links

Other AP2 family TFs
Other Brassica rapa TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_090530 Acremonium chrysogenum ACRE_090530 N
BBA_05678 Beauveria bassiana BBA_05678 N
BBA_09096 Beauveria bassiana BBA_09096 N
Bcin08g05570 Botrytis cinerea Bcin08g05570 N
CHGG_06117 Chaetomium globosum CHGG_06117 N
CPUR_04593 Claviceps purpurea CPUR_04593 N
CFIO01_05100 Colletotrichum fioriniae CFIO01_05100 N
GLRG_02657 Colletotrichum graminicola GLRG_02657 N
CH063_07963 Colletotrichum higginsianum CH063_07963 N
Cob_02607 Colletotrichum orbiculare Cob_02607 N
CSUB01_00007 Colletotrichum sublineola CSUB01_00007 N
CCM_07309 Cordyceps militaris CCM_07309 N
estExt_Genewise1Plus.C_110189 Cryphonectria parasitica estExt_Genewise1Plus.C_110189 N
FFUJ_05577 Fusarium fujikuroi FFUJ_05577 N
FGRRES_16399 Fusarium graminearum FGRRES_16399 N
FPSE_05593 Fusarium pseudograminearum FPSE_05593 N
NechaG92211 Fusarium solani NechaG92211 N
FVEG_13110 Fusarium verticillioides FVEG_13110 N
GGTG_04996 Gaeumannomyces graminis GGTG_04996 N
MGG_09002 Magnaporthe oryzae MGG_09002 N
MAC_07722 Metarhizium acridum MAC_07722 N
MAC_08257 Metarhizium acridum MAC_08257 N
MAM_07708 Metarhizium album MAM_07708 N
MANI_114498 Metarhizium anisopliae MANI_114498 N
MBR_06341 Metarhizium brunneum MBR_06341 N
MGU_06147 Metarhizium guizhouense MGU_06147 N
MAJ_06521 Metarhizium majus MAJ_06521 N
X797_007680 Metarhizium robertsii X797_007680 N
MYCTH_2089183 Myceliophthora thermophila MYCTH_2089183 N
fgenesh1_pm.sca_54_chr3_4_0000024 Nectria haematococca fgenesh1_pm.sca_54_chr3_4_0000024 N
vad-6 Neurospora crassa NCU09205 N
estExt_Genewise1Plus.C_70270 Neurospora discreta estExt_Genewise1Plus.C_70270 N
NEUTE1DRAFT_125863 Neurospora tetrasperma NEUTE1DRAFT_125863 N
OIDMADRAFT_152191 Oidiodendron maius OIDMADRAFT_152191 N
PFICI_13325 Pestalotiopsis fici PFICI_13325 N
PODANS_1_15900 Podospora anserina PODANS_1_15900 N
SAPIO_CDS4869 Scedosporium apiospermum SAPIO_CDS4869 N
SBOR_4456 Sclerotinia borealis SBOR_4456 N
SMAC_00182 Sordaria macrospora SMAC_00182 N
HMPREF1624_04976 Sporothrix schenckii HMPREF1624_04976 N
S40288_09581 Stachybotrys chartarum S40288_09581 N
S40288_07943 Stachybotrys chartarum S40288_07943 N
S40285_05622 Stachybotrys chlorohalonata S40285_05622 N
THITE_2112671 Thielavia terrestris THITE_2112671 N
VHEMI05419 Torrubiella hemipterigena VHEMI05419 N
TRIATDRAFT_293894 Trichoderma atroviride TRIATDRAFT_293894 N
TRIREDRAFT_76705 Trichoderma reesei TRIREDRAFT_76705 N
TRIVIDRAFT_113690 Trichoderma virens TRIVIDRAFT_113690 N
UV8b_3402 Ustilaginoidea virens UV8b_3402 N
VDBG_01884 Verticillium albo atrum VDBG_01884 N
VDBG_01884 Verticillium alfalfae VDBG_01884 N