Bra008200 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra008200 T001035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.795 0.980
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.795 0.980
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.795 0.980
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.725 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.692 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008200.1-P AP2 31 82

Links

Other AP2 family TFs
Other Brassica rapa TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AWRI1499_3090 Brettanomyces bruxellensis AWRI1499_3090 I
CaO19.12798 Candida albicans CaO19.12798 N
CD36_24740 Candida dubliniensis CD36_24740 N
PGUG_04835 Candida guilliermondii PGUG_04835 I
CLUG_00203 Candida lusitaniae CLUG_00203 I
G210_5810 Candida maltosa G210_5810 N
CORT_0C07270 Candida orthopsilosis CORT_0C07270 N
CPAG_02485 Candida parapsilosis CPAG_02485 N
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I
CANTEDRAFT_110774 Candida tenuis CANTEDRAFT_110774 N
CTRG_01928 Candida tropicalis CTRG_01928 N
CLUG_00203 Clavispora lusitaniae CLUG_00203 I
DEHA2C11418g Debaryomyces hansenii DEHA2C11418g N
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I
PAS_FragB_0075 Komagataella pastoris PAS_FragB_0075 I
KUCA_T00003059001 Kuraishia capsulata KUCA_T00003059001 N
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I
LELG_02329 Lodderomyces elongisporus LELG_02329 N
PGUG_04835 Meyerozyma guilliermondii PGUG_04835 I
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I
GNLVRS01_PISO0I01526g Millerozyma farinosa GNLVRS01_PISO0I01526g N
GNLVRS01_PISO0F02711g Millerozyma farinosa GNLVRS01_PISO0F02711g I
GNLVRS01_PISO0E01698g Millerozyma farinosa GNLVRS01_PISO0E01698g N
JL09_g5364 Pichia kudriavzevii JL09_g5364 N
XP_002490850.1 Pichia pastoris XP_002490850.1 I
gwh1.6.1.1306.1 Pichia stipitis gwh1.6.1.1306.1 N
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I
PICST_46395 Scheffersomyces stipitis PICST_46395 N
PICST_9952 Scheffersomyces stipitis PICST_9952 N
SPAPADRAFT_137810 Spathaspora passalidarum SPAPADRAFT_137810 N
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I
ZYRO0E08272g Zygosaccharomyces rouxii ZYRO0E08272g N