GNLVRS01_PISO0F02711g (Millerozyma farinosa)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GNLVRS01_PISO0F02711g T369818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.569 0.718
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.569 0.718
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.569 0.718
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.569 0.718
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.569 0.718
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.569 0.718
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.569 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE88499 Zinc cluster 15 53

Links

Other Zinc cluster family TFs
Other Millerozyma farinosa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I 0.683
AWRI1499_3090 Brettanomyces bruxellensis AWRI1499_3090 I 0.661
CLUG_00203 Candida lusitaniae CLUG_00203 I 0.654
CLUG_00203 Clavispora lusitaniae CLUG_00203 I 0.654
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I 0.653
CPAG_02485 Candida parapsilosis CPAG_02485 N 0.646
CORT_0C07270 Candida orthopsilosis CORT_0C07270 N 0.646
LELG_02329 Lodderomyces elongisporus LELG_02329 N 0.646
G210_5810 Candida maltosa G210_5810 N 0.632
CaO19.12798 Candida albicans CaO19.12798 N 0.631
CaO19.5338 Candida albicans CaO19.5338 N 0.631
CD36_24740 Candida dubliniensis CD36_24740 N 0.631
PICST_9952 Scheffersomyces stipitis PICST_9952 N 0.628
gwh1.6.1.1306.1 Pichia stipitis gwh1.6.1.1306.1 N 0.628
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I 0.617
CTRG_01928 Candida tropicalis CTRG_01928 N 0.615
JL09_g5364 Pichia kudriavzevii JL09_g5364 N 0.613
PAS_FragB_0075 Komagataella pastoris PAS_FragB_0075 I 0.612
XP_002490850.1 Pichia pastoris XP_002490850.1 I 0.612
PGUG_04835 Candida guilliermondii PGUG_04835 I 0.603
PGUG_04835 Meyerozyma guilliermondii PGUG_04835 I 0.603
SPAPADRAFT_137810 Spathaspora passalidarum SPAPADRAFT_137810 N 0.603
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I 0.586
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I 0.586
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I 0.586
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I 0.586
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I 0.586
ZYRO0E08272g Zygosaccharomyces rouxii ZYRO0E08272g N 0.581
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I 0.580
KUCA_T00003059001 Kuraishia capsulata KUCA_T00003059001 N 0.573
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I 0.569
GAL4 Saccharomyces cerevisiae YPL248C D 0.569
Scas_Contig699.7 Saccharomyces castellii Scas_Contig699.7 I 0.569
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I 0.569
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I 0.569
KUCA_T00002035001 Kuraishia capsulata KUCA_T00002035001 N 0.563
DEHA2C11418g Debaryomyces hansenii DEHA2C11418g N 0.560
GNLVRS01_PISO0E01698g Millerozyma farinosa GNLVRS01_PISO0E01698g N 0.552
GNLVRS01_PISO0I01526g Millerozyma farinosa GNLVRS01_PISO0I01526g N 0.552
CANTEDRAFT_110774 Candida tenuis CANTEDRAFT_110774 N 0.549
PICST_46395 Scheffersomyces stipitis PICST_46395 N 0.549
SKUD_900401 Saccharomyces kudriavzevii SKUD_900401 I 0.546
SU7_3455 Saccharomyces arboricola SU7_3455 I 0.546