OGLUM06G07380 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM06G07380 T003277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.724 0.863
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.711 0.824
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.692 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G07380.1 AP2 67 118

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.000
evm.TU.supercontig_81.11 Carica papaya evm.TU.supercontig_81.11 N 0.000
Eucgr.K00871 Eucalyptus grandis Eucgr.K00871 N 0.000
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.000
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.000
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.000
Lus10020069.g Linum usitatissimum Lus10020069.g N 0.000
cassava19334.valid.m1 Manihot esculenta cassava19334.valid.m1 N 0.000
mgf012088m Mimulus guttatus mgf012088m I 0.000
POPTR_0011s03360 Populus trichocarpa POPTR_0011s03360 N 0.000
SapurV1A.0028s0330 Salix purpurea SapurV1A.0028s0330 N 0.000
SapurV1A.0502s0080 Salix purpurea SapurV1A.0502s0080 N 0.000
SELMODRAFT_431241 Selaginella moellendorffii SELMODRAFT_431241 I 0.000
SELMODRAFT_405883 Selaginella moellendorffii SELMODRAFT_405883 I 0.000
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.000
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.000
VIT_19s0014g05100 Vitis vinifera VIT_19s0014g05100 N 0.000