PGSC0003DMG400045042 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400045042 T004518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.688 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400095471 AP2 14 66

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HRD Arabidopsis lyrata scaffold_402264.1 I 0.696
ERF024 Arabidopsis thaliana AT2G36450 D 0.688
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.694
Bo4g034600 Brassica oleracea Bo4g034600 I 0.694
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.703
Cla017994 Citrullus lanatus Cla017994 N 0.680
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.680
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.677
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.707
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.699
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.705
mgf018102m Mimulus guttatus mgf018102m N 0.738
mgf019185m Mimulus guttatus mgf019185m N 0.732
Pm026227 Prunus mume Pm026227 N 0.685
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.681
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.817
Solyc09g009240.1 Solanum lycopersicum Solyc09g009240.1 N 0.738
TCM_022462 Theobroma cacao TCM_022462 N 0.687