POPTR_0002s03090 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0002s03090 T004590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.782 0.918
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.782 0.918
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.782 0.918
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.724 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.692 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.683 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s03090.1 AP2 39 90

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019195 Ailuropoda melanoleuca ENSAMEG00000019195 I
ENSBTAP00000004817-D1 Bos grunniens ENSBTAP00000004817-D1 I
ZFP3 Bos taurus ENSBTAG00000003699 I
ZFP3 Callithrix jacchus ENSCJAG00000011539 I
ZFP3 Canis familiaris ENSCAFG00000028732 I
ENSCPOG00000006167 Cavia porcellus ENSCPOG00000006167 I
ENSCSAG00000000570 Chlorocebus sabaeus ENSCSAG00000000570 I
ZFP3 Dasypus novemcinctus ENSDNOG00000012978 I
Zfp3 Dipodomys ordii ENSDORG00000013955 I
ZFP3 Equus caballus ENSECAG00000002496 I
ZFP3 Gorilla gorilla ENSGGOG00000023389 I
ZFP3 Homo sapiens ENSG00000180787 D
ENSSTOG00000021828 Ictidomys tridecemlineatus ENSSTOG00000021828 I
ZFP3 Loxodonta africana ENSLAFG00000002940 I
ENSP00000320347 Macaca fascicularis ENSP00000320347 I
ENSMMUG00000004780 Macaca mulatta ENSMMUG00000004780 I
ENSMICG00000008082 Microcebus murinus ENSMICG00000008082 I
Myotis_brandtii_ZFP3_10007485 Myotis brandtii Myotis_brandtii_ZFP3_10007485 I
ZFP3 Myotis lucifugus ENSMLUG00000007598 I
ZFP3 Otolemur garnettii ENSOGAG00000027676 I
ENSOARG00000004280 Ovis aries ENSOARG00000004280 I
ZFP3 Pan troglodytes ENSPTRG00000008622 I
ENSPANG00000012200 Papio anubis ENSPANG00000012200 I
ENSPPYG00000007859 Pongo abelii ENSPPYG00000007859 I
ZFP3 Procavia capensis ENSPCAG00000010125 I
ZFP3 Pteropus vampyrus ENSPVAG00000000910 I
Zfp3 Rattus norvegicus ENSRNOG00000005009 I
ENSSSCG00000025235 Sus scrofa ENSSSCG00000025235 I
ENSTSYG00000004346 Tarsius syrichta ENSTSYG00000004346 I