POPTR_0006s05320 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0006s05320 T004650_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.795 0.940
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.767 0.920
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.684 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.684 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.684 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.680 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s05320.1 AP2 28 79

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001044 Acyrthosiphon pisum ACYPI001044 N
AAEL001925 Aedes aegypti AAEL001925 N
AALB005658 Anopheles albimanus AALB005658 N
AARA007828 Anopheles arabiensis AARA007828 N
AATE002182 Anopheles atroparvus AATE002182 N
ACHR006701 Anopheles christyi ACHR006701 N
ACOM025371 Anopheles coluzzii ACOM025371 N
ADIR007954 Anopheles dirus ADIR007954 N
AEPI005047 Anopheles epiroticus AEPI005047 N
AFAF017055 Anopheles farauti AFAF017055 N
AFUN003930 Anopheles funestus AFUN003930 N
AGAP007178 Anopheles gambiae AGAP007178 N
AMEC019779 Anopheles melas AMEC019779 N
AMEM017655 Anopheles merus AMEM017655 N
AMIN010644 Anopheles minimus AMIN010644 N
AQUA002099 Anopheles quadriannulatus AQUA002099 N
ASIS021701 Anopheles sinensis ASIS021701 N
ASTEI02720 Anopheles stephensi ASTEI02720 N
GB52555 Apis mellifera GB52555 N
ACEP16593 Atta cephalotes ACEP16593 N
BGIBMGA012698 Bombyx mori BGIBMGA012698 N
Cflo_07298--XP_396330.3_APIME Camponotus floridanus Cflo_07298--XP_396330.3_APIME N
CLEC006839 Cimex lectularius CLEC006839 N
CpipJ_CPIJ009909 Culex pipiens CpipJ_CPIJ009909 N
CPIJ009909 Culex quinquefasciatus CPIJ009909 N
KGM_05165 Danaus plexippus KGM_05165 N
DAPPUDRAFT_109629 Daphnia pulex DAPPUDRAFT_109629 N
YQE_04891 Dendroctonus ponderosae YQE_04891 N
GF10235 Drosophila ananassae FBgn0087276 N
GG14496 Drosophila erecta FBgn0106755 N
GH14579 Drosophila grimshawi FBgn0122055 N
GH22490 Drosophila grimshawi FBgn0129948 N
Tet Drosophila melanogaster FBgn0263392 N
GI13904 Drosophila mojavensis FBgn0136658 N
GL22430 Drosophila persimilis FBgn0160022 N
GA28320 Drosophila pseudoobscura FBgn0249682 N
GM14099 Drosophila sechellia FBgn0169028 N
GD13370 Drosophila simulans FBgn0185084 N
GK17628 Drosophila willistoni FBgn0219627 N
GE21684 Drosophila yakuba FBgn0238932 N
HHAL006470-PA Halyomorpha halys HHAL006470-PA N
Hsal_06375--XP_396330.3_APIME Harpegnathos saltator Hsal_06375--XP_396330.3_APIME N
HMEL013359 Heliconius melpomene HMEL013359 N
ISCW023645 Ixodes scapularis ISCW023645 N
LDEC020316 Leptinotarsa decemlineata LDEC020316 N
LCUP015162 Lucilia cuprina LCUP015162 N
MESCA007735 Megaselia scalaris MESCA007735 N
MDOA007787 Musca domestica MDOA007787 N
NV14212 Nasonia vitripennis NV14212 N
PHUM058930 Pediculus humanus PHUM058930 N
RPRC001841 Rhodnius prolixus RPRC001841 N
SINV21580 Solenopsis invicta SINV21580 N
TC013796 Tribolium castaneum TC013796 N
L798_15814 Zootermopsis nevadensis L798_15814 N