CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q3T5M9_WHEAT
(
Triticum aestivum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Q3T5M9_WHEAT
T004918_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q3T5M9_WHEAT
M09716_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF2_02
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8S4P8_HORVD
M09723_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF2_03
0.731
0.759
Q8W236_WHEAT
M09724_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF1_02
0.704
0.685
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q3T5M9_WHEAT
AP2
48
103
PVYRGVRRRGREGQWVCELRVPAGSRSYSRIWLGTFASAQMAARAHDSAALALSGR
Links
Other
AP2
family TFs
Other
Triticum aestivum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_17024
Aegilops tauschii
F775_17024
I
0.000
F775_28711
Aegilops tauschii
F775_28711
I
0.000
F775_31964
Aegilops tauschii
F775_31964
I
0.000
F775_32479
Aegilops tauschii
F775_32479
I
0.000
F775_43558
Aegilops tauschii
F775_43558
I
0.000
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.000
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
0.000
AMTR_s00152p00081700
Amborella trichopoda
AMTR_s00152p00081700
I
0.000
Aquca_009_00009
Aquilegia coerulea
Aquca_009_00009
I
0.000
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.000
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
0.000
FD
Arabidopsis lyrata
Al_scaffold_0007_453
I
0.000
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
0.000
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.000
ATBZIP27
Arabidopsis thaliana
AT2G17770
I
0.000
ABI5
Arabidopsis thaliana
AT2G36270
D
0.000
EEL
Arabidopsis thaliana
AT2G41070
I
0.000
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.000
FD
Arabidopsis thaliana
AT4G35900
I
0.000
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.000
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.000
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
0.000
BRADI1G17335
Brachypodium distachyon
BRADI1G17335
I
0.000
BRADI1G63840
Brachypodium distachyon
BRADI1G63840
I
0.000
BRADI2G21820
Brachypodium distachyon
BRADI2G21820
I
0.000
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
0.000
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.000
Bo4g012940
Brassica oleracea
Bo4g012940
I
0.000
Bo4g112690
Brassica oleracea
Bo4g112690
I
0.000
Bo6g072380
Brassica oleracea
Bo6g072380
I
0.000
Bo8g091160
Brassica oleracea
Bo8g091160
I
0.000
Bra003253
Brassica rapa
Bra003253
I
0.000
Bra007274
Brassica rapa
Bra007274
I
0.000
Bra007276
Brassica rapa
Bra007276
I
0.000
Bra014668
Brassica rapa
Bra014668
I
0.000
Bra016953
Brassica rapa
Bra016953
I
0.000
PK24978.1
Cannabis sativa
PK24978.1
D
0.000
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.000
Cagra.1642s0072
Capsella grandiflora
Cagra.1642s0072
I
0.000
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.000
Carubv10023893m.g
Capsella rubella
Carubv10023893m.g
I
0.000
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
0.000
Ca_08143
Cicer arietinum
Ca_08143
I
0.000
Ca_15706
Cicer arietinum
Ca_15706
I
0.000
Ca_23748
Cicer arietinum
Ca_23748
I
0.000
Cla009066
Citrullus lanatus
Cla009066
I
0.000
Cla013878
Citrullus lanatus
Cla013878
I
0.000
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.000
Ciclev10002029m.g
Citrus clementina
Ciclev10002029m.g
I
0.000
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.000
Ciclev10028635m.g
Citrus clementina
Ciclev10028635m.g
I
0.000
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.000
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.000
orange1.1g037676m.g
Citrus sinensis
orange1.1g037676m.g
I
0.000
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
0.000
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.000
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
0.000
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
0.000
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.000
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.000
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.000
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
0.000
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.000
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.000
GLYMA04G14840
Glycine max
GLYMA04G14840
I
0.000
GLYMA05G25200
Glycine max
GLYMA05G25200
I
0.000
GLYMA06G47220
Glycine max
GLYMA06G47220
I
0.000
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.000
GLYMA10G08370
Glycine max
GLYMA10G08370
I
0.000
GLYMA13G22061
Glycine max
GLYMA13G22061
I
0.000
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.000
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.000
Gorai.005G259700
Gossypium raimondii
Gorai.005G259700
I
0.000
Gorai.007G191800
Gossypium raimondii
Gorai.007G191800
I
0.000
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.000
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.000
MLOC_16096
Hordeum vulgare
MLOC_16096
I
0.000
MLOC_34679
Hordeum vulgare
MLOC_34679
I
0.000
MLOC_4554
Hordeum vulgare
MLOC_4554
I
0.000
MLOC_61490
Hordeum vulgare
MLOC_61490
I
0.000
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.000
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
0.000
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
0.000
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
0.000
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
0.000
Lus10009755.g
Linum usitatissimum
Lus10009755.g
I
0.000
Lus10014194.g
Linum usitatissimum
Lus10014194.g
I
0.000
Lus10022720.g
Linum usitatissimum
Lus10022720.g
I
0.000
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
0.000
chr4.CM0337.330.nc
Lotus japonicus
chr4.CM0337.330.nc
I
0.000
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I
0.000
MDP0000215106
Malus domestica
MDP0000215106
I
0.000
MDP0000273211
Malus domestica
MDP0000273211
I
0.000
MDP0000706379
Malus domestica
MDP0000706379
I
0.000
MDP0000740787
Malus domestica
MDP0000740787
I
0.000
cassava11518.m1
Manihot esculenta
cassava11518.m1
I
0.000
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
0.000
cassava17300.m1
Manihot esculenta
cassava17300.m1
I
0.000
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
0.000
MTR_3g010660
Medicago truncatula
MTR_3g010660
I
0.000
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.000
MTR_8g043960
Medicago truncatula
MTR_8g043960
I
0.000
mgf002556m
Mimulus guttatus
mgf002556m
I
0.000
mgf011003m
Mimulus guttatus
mgf011003m
I
0.000
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
0.000
GSMUA_Achr2G20490_001
Musa acuminata
GSMUA_Achr2G20490_001
I
0.000
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
0.000
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
0.000
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
0.000
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
0.000
OBART01G34790
Oryza barthii
OBART01G34790
I
0.000
OBART01G37980
Oryza barthii
OBART01G37980
I
0.000
OBART05G21000
Oryza barthii
OBART05G21000
I
0.000
OBART07G26790
Oryza barthii
OBART07G26790
I
0.000
OB01G46760
Oryza brachyantha
OB01G46760
I
0.000
OB05G28440
Oryza brachyantha
OB05G28440
I
0.000
OB07G32300
Oryza brachyantha
OB07G32300
I
0.000
ORGLA01G0286100
Oryza glaberrima
ORGLA01G0286100
I
0.000
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
0.000
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.000
OGLUM01G38810
Oryza glumaepatula
OGLUM01G38810
I
0.000
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.000
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.000
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.000
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.000
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
0.000
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
0.000
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.000
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
0.000
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.000
OLONG_002030
Oryza longistaminata
OLONG_002030
I
0.000
OLONG_003399
Oryza longistaminata
OLONG_003399
I
0.000
OLONG_014546
Oryza longistaminata
OLONG_014546
I
0.000
OMERI01G32080
Oryza meridionalis
OMERI01G32080
I
0.000
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
0.000
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.000
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
0.000
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.000
ONIVA01G39770
Oryza nivara
ONIVA01G39770
I
0.000
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.000
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.000
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.000
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.000
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.000
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
0.000
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.000
ORUFI01G38120
Oryza rufipogon
ORUFI01G38120
I
0.000
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.000
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
0.000
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.000
OS01G0813100
Oryza sativa
OS01G0813100
I
0.000
OS01G0859300
Oryza sativa
OS01G0859300
I
0.000
OS03G0322700
Oryza sativa
OS03G0322700
I
0.000
OS05G0489700
Oryza sativa
OS05G0489700
I
0.000
OS07G0686100
Oryza sativa
OS07G0686100
I
0.000
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.000
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.000
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
0.000
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
0.000
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
0.000
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
0.000
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
0.000
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
0.000
ABI5
Populus trichocarpa
POPTR_0006s08300
I
0.000
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
0.000
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
0.000
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
0.000
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
0.000
Pm001315
Prunus mume
Pm001315
I
0.000
Pm004043
Prunus mume
Pm004043
I
0.000
Pm016826
Prunus mume
Pm016826
I
0.000
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.000
PRUPE_ppa025544mg
Prunus persica
PRUPE_ppa025544mg
I
0.000
29625.m000702
Ricinus communis
29625.m000702
I
0.000
29955.m001177
Ricinus communis
29955.m001177
I
0.000
30055.m001548
Ricinus communis
30055.m001548
I
0.000
30226.m002055
Ricinus communis
30226.m002055
I
0.000
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.000
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
0.000
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.000
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
0.000
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
0.000
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
0.000
SELMODRAFT_443424
Selaginella moellendorffii
SELMODRAFT_443424
I
0.000
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
0.000
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
0.000
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
0.000
Si001731m.g
Setaria italica
Si001731m.g
I
0.000
Si002173m.g
Setaria italica
Si002173m.g
I
0.000
Si022639m.g
Setaria italica
Si022639m.g
I
0.000
Solyc01g104650.2
Solanum lycopersicum
Solyc01g104650.2
I
0.000
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.000
PGSC0003DMG400007208
Solanum tuberosum
PGSC0003DMG400007208
I
0.000
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.000
PGSC0003DMG400029774
Solanum tuberosum
PGSC0003DMG400029774
I
0.000
Sb01g036810
Sorghum bicolor
Sb01g036810
I
0.000
Sb02g043620
Sorghum bicolor
Sb02g043620
I
0.000
Sb03g037740
Sorghum bicolor
Sb03g037740
I
0.000
Sb03g040510
Sorghum bicolor
Sb03g040510
I
0.000
Sb09g023920
Sorghum bicolor
Sb09g023920
I
0.000
TCM_000152
Theobroma cacao
TCM_000152
I
0.000
TCM_044596
Theobroma cacao
TCM_044596
I
0.000
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.000
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.000
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.000
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.000
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
0.000
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
0.000
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
0.000
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
0.000
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
0.000
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.000
Traes_4AS_F9C171219
Triticum aestivum
Traes_4AS_F9C171219
I
0.000
Traes_4BL_4C9A415F3
Triticum aestivum
Traes_4BL_4C9A415F3
I
0.000
Traes_4DL_F38ED7FB6
Triticum aestivum
Traes_4DL_F38ED7FB6
I
0.000
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
0.000
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
0.000
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.000
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.000
TRIUR3_15490
Triticum urartu
TRIUR3_15490
I
0.000
TRIUR3_21253
Triticum urartu
TRIUR3_21253
I
0.000
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
0.000
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
0.000
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.000
DPBF2
Vitis vinifera
VIT_06s0080g00340
I
0.000
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.000
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.000
GRMZM2G077124
Zea mays
GRMZM2G077124
I
0.000
GRMZM2G159134
Zea mays
GRMZM2G159134
I
0.000
GRMZM2G161009
Zea mays
GRMZM2G161009
I
0.000
GRMZM2G168079
Zea mays
GRMZM2G168079
I
0.000