CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q3T5M9_WHEAT
(
Triticum aestivum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Q3T5M9_WHEAT
T004918_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q3T5M9_WHEAT
M09716_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF2_02
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8S4P8_HORVD
M09723_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF2_03
0.731
0.759
Q8W236_WHEAT
M09724_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF1_02
0.704
0.685
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q3T5M9_WHEAT
AP2
48
103
PVYRGVRRRGREGQWVCELRVPAGSRSYSRIWLGTFASAQMAARAHDSAALALSGR
Links
Other
AP2
family TFs
Other
Triticum aestivum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_25503
Aegilops tauschii
F775_25503
I
0.892
TRIUR3_29805
Triticum urartu
TRIUR3_29805
I
0.892
F775_00827
Aegilops tauschii
F775_00827
I
0.759
Traes_5BL_8D6C8E27F
Triticum aestivum
Traes_5BL_8D6C8E27F
I
0.742
Q8S4P8_HORVD
Hordeum vulgare
Q8S4P8_HORVD
D
0.731
Traes_5BL_199A847E4
Triticum aestivum
Traes_5BL_199A847E4
I
0.721
Traes_5DL_BFA40F938
Triticum aestivum
Traes_5DL_BFA40F938
I
0.720
MLOC_54227
Hordeum vulgare
MLOC_54227
I
0.718
TRIUR3_21819
Triticum urartu
TRIUR3_21819
I
0.716
Q8W236_WHEAT
Triticum aestivum
Q8W236_WHEAT
D
0.704
MLOC_59224
Hordeum vulgare
MLOC_59224
I
0.693
Traes_5BL_B6A784025
Triticum aestivum
Traes_5BL_B6A784025
I
0.693
Traes_5BL_B795CE108
Triticum aestivum
Traes_5BL_B795CE108
I
0.693
Traes_5DL_45B242D3E1
Triticum aestivum
Traes_5DL_45B242D3E1
I
0.693
Traes_5DL_62A4CE1CC
Triticum aestivum
Traes_5DL_62A4CE1CC
I
0.693
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.681