MLOC_59224 (Hordeum vulgare)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MLOC_59224 T002717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8W236_WHEAT
M09724_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF1_02 		0.726 0.840
Q3T5M9_WHEAT
M09716_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF2_02 		0.693 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_59224.1 AP2 36 89

Links

Other AP2 family TFs
Other Hordeum vulgare TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5BL_B795CE108 Triticum aestivum Traes_5BL_B795CE108 I 0.853
Traes_5DL_45B242D3E1 Triticum aestivum Traes_5DL_45B242D3E1 I 0.853
F775_15419 Aegilops tauschii F775_15419 I 0.808
Traes_5BL_199A847E4 Triticum aestivum Traes_5BL_199A847E4 I 0.757
Traes_5DL_62A4CE1CC Triticum aestivum Traes_5DL_62A4CE1CC I 0.728
Q8W236_WHEAT Triticum aestivum Q8W236_WHEAT D 0.726
Traes_5BL_B6A784025 Triticum aestivum Traes_5BL_B6A784025 I 0.720
MLOC_54227 Hordeum vulgare MLOC_54227 I 0.716
OPUNC06G01430 Oryza punctata OPUNC06G01430 N 0.701
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.699
Traes_5DL_BFA40F938 Triticum aestivum Traes_5DL_BFA40F938 I 0.698
F775_25503 Aegilops tauschii F775_25503 I 0.693
Q3T5M9_WHEAT Triticum aestivum Q3T5M9_WHEAT D 0.693
TRIUR3_29805 Triticum urartu TRIUR3_29805 I 0.693
DREB1C Oryza indica BGIOSGA022219 N 0.692
GRMZM2G380377 Zea mays GRMZM2G380377 N 0.692
LPERR06G01360 Leersia perrieri LPERR06G01360 N 0.692
OMERI06G01670 Oryza meridionalis OMERI06G01670 N 0.692
ONIVA06G01850 Oryza nivara ONIVA06G01850 N 0.692
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.692
ORUFI06G01550 Oryza rufipogon ORUFI06G01550 N 0.692
DREB1C Oryza sativa OS06G0127100 N 0.692
Sb10g001620 Sorghum bicolor Sb10g001620 N 0.692
Si007199m.g Setaria italica Si007199m.g N 0.692
Pavir.J35991 Panicum virgatum Pavir.J35991 N 0.692
TRIUR3_21819 Triticum urartu TRIUR3_21819 I 0.681
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.679
BRADI4G35570 Brachypodium distachyon BRADI4G35570 N 0.677