HRD (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_08s0007g03810 T006069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0007g03810.t01 AP2 38 89

Links

Other AP2 family TFs
Other Vitis vinifera TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00393 Aquilegia coerulea Aquca_027_00393 N 0.704
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.725
Ca_00768 Cicer arietinum Ca_00768 N 0.715
Ciclev10012757m.g Citrus clementina Ciclev10012757m.g N 0.679
orange1.1g039696m.g Citrus sinensis orange1.1g039696m.g N 0.679
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.696
Eucgr.K02071 Eucalyptus grandis Eucgr.K02071 N 0.701
gene30159-v1.0-hybrid Fragaria vesca gene30159-v1.0-hybrid N 0.700
GLYMA10G07740 Glycine max GLYMA10G07740 N 0.704
GLYMA03G34970 Glycine max GLYMA03G34970 N 0.734
GLYMA13G21560 Glycine max GLYMA13G21560 N 0.701
GLYMA15G02900 Glycine max GLYMA15G02900 N 0.734
GLYMA19G37670 Glycine max GLYMA19G37670 N 0.734
Gorai.009G407200 Gossypium raimondii Gorai.009G407200 N 0.681
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.721
Lus10023873.g Linum usitatissimum Lus10023873.g N 0.743
Lus10014376.g Linum usitatissimum Lus10014376.g N 0.743
LjSGA_035548.1 Lotus japonicus LjSGA_035548.1 N 0.738
MDP0000195376 Malus domestica MDP0000195376 N 0.747
MDP0000833641 Malus domestica MDP0000833641 N 0.715
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.726
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.719
POPTR_0006s02180 Populus trichocarpa POPTR_0006s02180 N 0.744
POPTR_0016s02010 Populus trichocarpa POPTR_0016s02010 N 0.732
Pm026227 Prunus mume Pm026227 N 0.707
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.712
29092.m000462 Ricinus communis 29092.m000462 N 0.762
SapurV1A.0154s0220 Salix purpurea SapurV1A.0154s0220 N 0.735
TCM_022462 Theobroma cacao TCM_022462 N 0.694