cassava15495.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava15495.m1 T006808_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.815 0.980
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.765 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.685 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15495.m1 AP2 23 74

Links

Other AP2 family TFs
Other Manihot esculenta TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_08438 Capronia epimyces A1O3_08438 N
PV04_00852 Capronia semiimmersa PV04_00852 N
Z519_01928 Cladophialophora bantiana Z519_01928 N
G647_01193 Cladophialophora carrionii G647_01193 N
PV07_06399 Cladophialophora immunda PV07_06399 N
A1O5_11821 Cladophialophora psammophila A1O5_11821 N
A1O9_11923 Exophiala aquamarina A1O9_11923 N
PV06_10667 Exophiala oligosperma PV06_10667 N
PV11_10218 Exophiala sideris PV11_10218 N
PV08_05094 Exophiala spinifera PV08_05094 N
PV05_02171 Exophiala xenobiotica PV05_02171 N