e_gw1.66.73.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 e_gw1.66.73.1 T007167_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.902 0.886
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.902 0.886
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.887 0.914
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.887 0.914
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.883 0.895
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.883 0.895
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.872 0.876
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.872 0.876
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.66.73.1 AP2 58 118
e_gw1.66.73.1 AP2 160 212

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

620 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_09991 Aegilops tauschii F775_09991 I 0.000
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.000
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.000
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N 0.000
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.000
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.000
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.000
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N 0.000
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.000
ARF11 Arabidopsis thaliana AT2G46530 I 0.000
ETC1 Arabidopsis thaliana AT1G01380 N 0.000
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.000
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.000
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.000
Bostr.9638s0030 Boechera stricta Bostr.9638s0030 I 0.000
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.000
BRADI3G04920 Brachypodium distachyon BRADI3G04920 I 0.000
BRADI4G07470 Brachypodium distachyon BRADI4G07470 I 0.000
BRADI5G25767 Brachypodium distachyon BRADI5G25767 I 0.000
Bo4g136370 Brassica oleracea Bo4g136370 I 0.000
Bra028110 Brassica rapa Bra028110 I 0.000
PK26077.1 Cannabis sativa PK26077.1 I 0.000
PK27862.1 Cannabis sativa PK27862.1 I 0.000
PK11198.1 Cannabis sativa PK11198.1 N 0.000
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.000
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.000
Cagra.6767s0001 Capsella grandiflora Cagra.6767s0001 I 0.000
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.000
Carubv10004139m.g Capsella rubella Carubv10004139m.g I 0.000
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.000
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.000
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.000
evm.TU.supercontig_17.53 Carica papaya evm.TU.supercontig_17.53 I 0.000
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.000
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.000
Ca_00467 Cicer arietinum Ca_00467 I 0.000
Ca_02516 Cicer arietinum Ca_02516 N 0.000
Ca_08872 Cicer arietinum Ca_08872 I 0.000
Ca_15694 Cicer arietinum Ca_15694 I 0.000
Cla005884 Citrullus lanatus Cla005884 I 0.000
Cla013021 Citrullus lanatus Cla013021 I 0.000
Cla019844 Citrullus lanatus Cla019844 I 0.000
Ciclev10011065m.g Citrus clementina Ciclev10011065m.g I 0.000
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.000
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.000
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.000
orange1.1g003544m.g Citrus sinensis orange1.1g003544m.g I 0.000
Cucsa.071070 Cucumis sativus Cucsa.071070 I 0.000
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.000
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.000
Eucgr.A02065 Eucalyptus grandis Eucgr.A02065 I 0.000
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.000
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.000
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.000
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.000
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.000
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N 0.000
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.000
gene12917-v1.0-hybrid Fragaria vesca gene12917-v1.0-hybrid I 0.000
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I 0.000
gene22728-v1.0-hybrid Fragaria vesca gene22728-v1.0-hybrid I 0.000
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.000
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.000
gene31631-v1.0-hybrid Fragaria vesca gene31631-v1.0-hybrid I 0.000
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N 0.000
GLYMA02G45100 Glycine max GLYMA02G45100 I 0.000
GLYMA05G27580 Glycine max GLYMA05G27580 I 0.000
GLYMA08G10550 Glycine max GLYMA08G10550 I 0.000
GLYMA13G17270 Glycine max GLYMA13G17270 I 0.000
GLYMA14G03650 Glycine max GLYMA14G03650 I 0.000
GLYMA17G05220 Glycine max GLYMA17G05220 I 0.000
GLYMA18G05330 Glycine max GLYMA18G05330 I 0.000
GLYMA06G45941 Glycine max GLYMA06G45941 N 0.000
GLYMA12G10790 Glycine max GLYMA12G10790 N 0.000
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.000
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.000
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.000
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.000
Gorai.007G131900 Gossypium raimondii Gorai.007G131900 I 0.000
Gorai.008G054600 Gossypium raimondii Gorai.008G054600 I 0.000
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.000
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.000
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.000
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N 0.000
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N 0.000
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N 0.000
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.000
MLOC_51932 Hordeum vulgare MLOC_51932 I 0.000
MLOC_66152 Hordeum vulgare MLOC_66152 I 0.000
LPERR06G05720 Leersia perrieri LPERR06G05720 I 0.000
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.000
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.000
Lus10020804.g Linum usitatissimum Lus10020804.g I 0.000
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.000
chr2.CM0201.60.nd Lotus japonicus chr2.CM0201.60.nd I 0.000
chr4.CM0006.290.nc Lotus japonicus chr4.CM0006.290.nc I 0.000
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.000
LjSGA_069146.1 Lotus japonicus LjSGA_069146.1 I 0.000
MDP0000139073 Malus domestica MDP0000139073 I 0.000
MDP0000153538 Malus domestica MDP0000153538 I 0.000
MDP0000194603 Malus domestica MDP0000194603 I 0.000
MDP0000232417 Malus domestica MDP0000232417 I 0.000
MDP0000268306 Malus domestica MDP0000268306 I 0.000
MDP0000319957 Malus domestica MDP0000319957 I 0.000
MDP0000876321 Malus domestica MDP0000876321 I 0.000
MDP0000886637 Malus domestica MDP0000886637 I 0.000
MDP0000216918 Malus domestica MDP0000216918 N 0.000
MDP0000270078 Malus domestica MDP0000270078 N 0.000
MDP0000499190 Malus domestica MDP0000499190 N 0.000
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.000
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.000
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.000
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.000
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.000
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.000
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.000
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.000
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.000
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.000
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.000
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.000
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.000
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.000
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.000
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.000
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.000
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.000
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.000
cassava4691.m1 Manihot esculenta cassava4691.m1 N 0.000
MTR_8g101360 Medicago truncatula MTR_8g101360 I 0.000
MTR_4g046737 Medicago truncatula MTR_4g046737 N 0.000
mgf003543m Mimulus guttatus mgf003543m I 0.000
mgf005549m Mimulus guttatus mgf005549m I 0.000
mgf005961m Mimulus guttatus mgf005961m I 0.000
mgf009009m Mimulus guttatus mgf009009m N 0.000
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.000
GSMUA_Achr4G25960_001 Musa acuminata GSMUA_Achr4G25960_001 I 0.000
GSMUA_Achr5G26580_001 Musa acuminata GSMUA_Achr5G26580_001 I 0.000
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I 0.000
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.000
OBART06G06150 Oryza barthii OBART06G06150 I 0.000
OB06G15720 Oryza brachyantha OB06G15720 I 0.000
ORGLA06G0056900 Oryza glaberrima ORGLA06G0056900 I 0.000
OGLUM06G06490 Oryza glumaepatula OGLUM06G06490 I 0.000
ARF16 Oryza indica BGIOSGA022468 I 0.000
OLONG_009780 Oryza longistaminata OLONG_009780 I 0.000
OLONG_013033 Oryza longistaminata OLONG_013033 I 0.000
OMERI03G32190 Oryza meridionalis OMERI03G32190 I 0.000
ONIVA06G07160 Oryza nivara ONIVA06G07160 I 0.000
OPUNC06G05940 Oryza punctata OPUNC06G05940 I 0.000
ORUFI06G06450 Oryza rufipogon ORUFI06G06450 I 0.000
OS06G0196700 Oryza sativa OS06G0196700 I 0.000
Pavir.Aa03303 Panicum virgatum Pavir.Aa03303 I 0.000
Pavir.Ab00451 Panicum virgatum Pavir.Ab00451 I 0.000
Pavir.Da00065 Panicum virgatum Pavir.Da00065 I 0.000
Pavir.Db00366 Panicum virgatum Pavir.Db00366 I 0.000
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.000
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.000
e_gw1.65.212.1 Physcomitrella patens e_gw1.65.212.1 I 0.000
estExt_fgenesh1_pg.C_1630077 Physcomitrella patens estExt_fgenesh1_pg.C_1630077 I 0.000
POPTR_0001s13110 Populus trichocarpa POPTR_0001s13110 I 0.000
POPTR_0001s36900 Populus trichocarpa POPTR_0001s36900 I 0.000
POPTR_0002s05590 Populus trichocarpa POPTR_0002s05590 I 0.000
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.000
POPTR_0005s22930 Populus trichocarpa POPTR_0005s22930 I 0.000
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.000
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.000
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.000
Pm010467 Prunus mume Pm010467 I 0.000
Pm014818 Prunus mume Pm014818 I 0.000
Pm018352 Prunus mume Pm018352 I 0.000
Pm019941 Prunus mume Pm019941 I 0.000
Pm009748 Prunus mume Pm009748 N 0.000
PRUPE_ppa001069mg Prunus persica PRUPE_ppa001069mg I 0.000
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.000
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.000
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.000
29599.m000177 Ricinus communis 29599.m000177 I 0.000
29769.m000463 Ricinus communis 29769.m000463 I 0.000
29842.m003592 Ricinus communis 29842.m003592 N 0.000
29842.m003644 Ricinus communis 29842.m003644 N 0.000
30086.m000210 Ricinus communis 30086.m000210 N 0.000
30169.m006531 Ricinus communis 30169.m006531 N 0.000
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.000
SapurV1A.0076s0280 Salix purpurea SapurV1A.0076s0280 I 0.000
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.000
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.000
SapurV1A.1257s0090 Salix purpurea SapurV1A.1257s0090 I 0.000
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.000
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.000
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.000
SapurV1A.0610s0050 Salix purpurea SapurV1A.0610s0050 N 0.000
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.000
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.000
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.000
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.000
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.000
SELMODRAFT_181404 Selaginella moellendorffii SELMODRAFT_181404 I 0.000
SELMODRAFT_182255 Selaginella moellendorffii SELMODRAFT_182255 I 0.000
Solyc08g008380.2 Solanum lycopersicum Solyc08g008380.2 I 0.000
Solyc12g006340.1 Solanum lycopersicum Solyc12g006340.1 I 0.000
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N 0.000
PGSC0003DMG400028826 Solanum tuberosum PGSC0003DMG400028826 I 0.000
Sb04g004430 Sorghum bicolor Sb04g004430 I 0.000
Sb10g006440 Sorghum bicolor Sb10g006440 I 0.000
TCM_001906 Theobroma cacao TCM_001906 I 0.000
TCM_016500 Theobroma cacao TCM_016500 I 0.000
TCM_017488 Theobroma cacao TCM_017488 I 0.000
TCM_029410 Theobroma cacao TCM_029410 I 0.000
TCM_011327 Theobroma cacao TCM_011327 N 0.000
TCM_015351 Theobroma cacao TCM_015351 N 0.000
TCM_030163 Theobroma cacao TCM_030163 N 0.000
TCM_030224 Theobroma cacao TCM_030224 N 0.000
TCM_046858 Theobroma cacao TCM_046858 N 0.000
Traes_2AL_A7941CB12 Triticum aestivum Traes_2AL_A7941CB12 I 0.000
Traes_2DL_8434C0251 Triticum aestivum Traes_2DL_8434C0251 I 0.000
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.000
Traes_6AS_10D92215D Triticum aestivum Traes_6AS_10D92215D I 0.000
Traes_6BS_BD894AD26 Triticum aestivum Traes_6BS_BD894AD26 I 0.000
Traes_6DS_F95C12EBB Triticum aestivum Traes_6DS_F95C12EBB I 0.000
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I 0.000
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I 0.000
TRIUR3_28948 Triticum urartu TRIUR3_28948 I 0.000
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.000
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.000
VIT_11s0065g00310 Vitis vinifera VIT_11s0065g00310 I 0.000
VIT_12s0028g01170 Vitis vinifera VIT_12s0028g01170 I 0.000
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.000
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N 0.000
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N 0.000
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.000
GRMZM2G028980 Zea mays GRMZM2G028980 I 0.000
GRMZM2G160005 Zea mays GRMZM2G160005 I 0.000