Lus10031657.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10031657.g T008883_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.756 0.940
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.756 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.717 0.860
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.717 0.860
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.717 0.860
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.695 0.880
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.695 0.880
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.695 0.880
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.695 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10031657 AP2 48 99

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10568.1 Alternaria brassicicola AB10568.1 I
AB04090.1 Alternaria brassicicola AB04090.1 I
AOL_s00076g701 Arthrobotrys oligospora AOL_s00076g701 I
ARB_07827 Arthroderma benhamiae ARB_07827 I
MCYG_01012 Arthroderma otae MCYG_01012 I
fgenesh1_pg.00866_#_462 Aspergillus carbonarius fgenesh1_pg.00866_#_462 I
ACLA_039850 Aspergillus clavatus CADACLAG00003794 I
CADAFLAG00002433 Aspergillus flavus CADAFLAG00002433 I
AFUA_3G11970 Aspergillus fumigatus CADAFUAG00005110 I
ANIA_02855 Aspergillus nidulans CADANIAG00010235 I
CADANGAG00002305 Aspergillus niger CADANGAG00002305 I
CADAORAG00001352 Aspergillus oryzae CADAORAG00001352 I
EURHEDRAFT_457463 Aspergillus ruber EURHEDRAFT_457463 I
AUEXF2481DRAFT_70429 Aureobasidium subglaciale AUEXF2481DRAFT_70429 I
BAUCODRAFT_135551 Baudoinia compniacensis BAUCODRAFT_135551 I
COCC4DRAFT_68984 Bipolaris maydis COCC4DRAFT_68984 I
COCMIDRAFT_86168 Bipolaris oryzae COCMIDRAFT_86168 I
COCSADRAFT_184320 Bipolaris sorokiniana COCSADRAFT_184320 I
COCVIDRAFT_28133 Bipolaris victoriae COCVIDRAFT_28133 I
COCCADRAFT_5408 Bipolaris zeicola COCCADRAFT_5408 I
BDDG_07520 Blastomyces dermatitidis BDDG_07520 I
BGHDH14_bgh01021 Blumeria graminis BGHDH14_bgh01021 I
orf19.7247 Candida albicans orf19.7247 D
CaO19.7247 Candida albicans CaO19.7247 I
CD36_13310 Candida dubliniensis CD36_13310 I
CLUG_01736 Candida lusitaniae CLUG_01736 I
CLUG_01736 Clavispora lusitaniae CLUG_01736 I
CIMG_03725 Coccidioides immitis CIMG_03725 I
CPC735_005640 Coccidioides posadasii CPC735_005640 I
estExt_Genewise1Plus.C_11603 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11603 I
L804_06405 Cryptococcus gattii L804_06405 N
CNH00970 Cryptococcus neoformans CNH00970 N
DACRYDRAFT_55334 Dacryopinax sp DACRYDRAFT_55334 I
H072_3224 Dactylellina haptotyla H072_3224 I
EPUS_09090 Endocarpon pusillum EPUS_09090 I
PV10_09015 Exophiala mesophila PV10_09015 I
PV05_10934 Exophiala xenobiotica PV05_10934 I
M7I_4960 Glarea lozoyensis M7I_4960 I
CMQ_7385 Grosmannia clavigera CMQ_7385 I
HCBG_07376 Histoplasma capsulatum HCBG_07376 I
LEMA_P072550.1 Leptosphaeria maculans LEMA_P072550.1 I
MPH_05702 Macrophomina phaseolina MPH_05702 I
MBM_08802 Marssonina brunnea MBM_08802 I
MCYG_01012 Microsporum canis MCYG_01012 I
MGYG_00974 Microsporum gypseum MGYG_00974 I
estExt_Genewise1Plus.C_11296 Mycosphaerella fijiensis estExt_Genewise1Plus.C_11296 I
e_gw1.4.120.1 Mycosphaerella graminicola e_gw1.4.120.1 I
UCRNP2_6201 Neofusicoccum parvum UCRNP2_6201 I
OIDMADRAFT_49510 Oidiodendron maius OIDMADRAFT_49510 I
F503_05381 Ophiostoma piceae uamh F503_05381 I
PABG_11557 Paracoccidioides brasiliensis PABG_11557 I
PAAG_07204 Paracoccidioides sp lutzii PAAG_07204 I
Pc18g00420 Penicillium chrysogenum Pc18g00420 I
PDIP_75300 Penicillium digitatum PDIP_75300 I
PEX1_059590 Penicillium expansum PEX1_059590 I
PITC_013310 Penicillium italicum PITC_013310 I
PMAA_023920 Penicillium marneffei PMAA_023920 I
PDE_05163 Penicillium oxalicum PDE_05163 I
PCH_Pc18g00420 Penicillium rubens PCH_Pc18g00420 I
U727_0043393201 Penicillium solitum U727_0043393201 I
SNOG_11739 Phaeosphaeria nodorum SNOG_11739 I
gww2.13.348.1 Phanerochaete chrysosporium gww2.13.348.1 I
PHLGIDRAFT_44970 Phlebiopsis gigantea PHLGIDRAFT_44970 I
gw1.13.295.1 Phycomyces blakesleeanus gw1.13.295.1 I
POSPLDRAFT_43009 Postia placenta POSPLDRAFT_43009 I
V499_08665 Pseudogymnoascus pannorum V499_08665 I
PTT_14738 Pyrenophora teres PTT_14738 I
PTRG_00091 Pyrenophora triticirepentis PTRG_00091 I
RO3G_02095 Rhizopus oryzae RO3G_02095 I
RO3G_01462 Rhizopus oryzae RO3G_01462 I
SAPIO_CDS0213 Scedosporium apiospermum SAPIO_CDS0213 I
SBOR_2712 Sclerotinia borealis SBOR_2712 I
M408DRAFT_49948 Serendipita vermifera M408DRAFT_49948 I
SETTUDRAFT_167089 Setosphaeria turcica SETTUDRAFT_167089 I
SEPMUDRAFT_145881 Sphaerulina musiva SEPMUDRAFT_145881 I
SNOG_11739 Stagonospora nodorum SNOG_11739 I
PMAA_023920 Talaromyces marneffei PMAA_023920 I
TSTA_032350 Talaromyces stipitatus TSTA_032350 I
VHEMI02022 Torrubiella hemipterigena VHEMI02022 I
TEQG_01042 Trichophyton equinum TEQG_01042 I
H101_07360 Trichophyton interdigitale H101_07360 I
H102_08253 Trichophyton rubrum H102_08253 I
H105_08281 Trichophyton soudanense H105_08281 I
M407DRAFT_17900 Tulasnella calospora M407DRAFT_17900 I
M407DRAFT_84761 Tulasnella calospora M407DRAFT_84761 I
UREG_07541 Uncinocarpus reesii UREG_07541 I
WALSEDRAFT_15215 Wallemia sebi WALSEDRAFT_15215 N
Mycgr3G40797 Zymoseptoria tritici Mycgr3G40797 I