MDP0000198054 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000198054 T009020_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.757 0.824
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.757 0.824
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.754 0.804
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.754 0.804
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.754 0.804
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.754 0.804
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.722 0.745
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.722 0.745
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.722 0.745
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.722 0.745
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.722 0.745
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.722 0.745
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.719 0.765
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.719 0.765
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.719 0.765
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.709 0.725
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.709 0.725
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.690 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000198054 AP2 160 212

Links

Other AP2 family TFs
Other Malus domestica TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I
RUNX2 Anolis carolinensis ENSACAG00000013003 I
RUNX3 Anolis carolinensis ENSACAG00000017855 I
Afo_R004888 Aptenodytes forsteri Afo_R004888 I
Afo_R008955 Aptenodytes forsteri Afo_R008955 I
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I
RUNX1 Bos taurus ENSBTAG00000004742 I
RUNX3 Bos taurus ENSBTAG00000019800 I
estExt_fgenesh2_kg.C_3770001 Branchiostoma floridae estExt_fgenesh2_kg.C_3770001 I
estExt_fgenesh2_kg.C_750001 Branchiostoma floridae estExt_fgenesh2_kg.C_750001 I
Brh_R000794 Buceros rhinoceros Brh_R000794 I
Brh_R001637 Buceros rhinoceros Brh_R001637 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
Aan_R005895 Calypte anna Aan_R005895 I
Aan_R007315 Calypte anna Aan_R007315 I
RUNX1 Canis familiaris ENSCAFG00000009596 I
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I
runx2a Danio rerio ENSDARG00000040261 I
runx3 Danio rerio ENSDARG00000052826 I
runx1 Danio rerio ENSDARG00000087646 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
Runx1 Dipodomys ordii ENSDORG00000004347 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX2 Equus caballus ENSECAG00000020875 I
RUNX2 Felis catus ENSFCAG00000022480 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I
ENSGMOG00000000378 Gadus morhua ENSGMOG00000000378 N
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I
RUNX1 Gallus gallus ENSGALG00000016022 I
runx3 Gasterosteus aculeatus ENSGACG00000007301 I
ENSGACG00000011721 Gasterosteus aculeatus ENSGACG00000011721 I
Gfo_R015914 Geospiza fortis Gfo_R015914 I
RUNX1 Gorilla gorilla ENSGGOG00000012862 I
RUNX1 Homo sapiens ENSG00000159216 D
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I
RUNX1 Loxodonta africana ENSLAFG00000004290 I
RUNX2 Loxodonta africana ENSLAFG00000005054 I
ENSP00000300305 Macaca fascicularis ENSP00000300305 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I
RUNX1 Microcebus murinus ENSMICG00000011998 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
Runx1 Mus musculus ENSMUSG00000022952 D
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I
RUNX2 Myotis lucifugus ENSMLUG00000000514 I
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I
Ogr17914 Ophisaurus gracilis Ogr17914 I
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I
runx3 Oryzias latipes ENSORLG00000017515 I
ENSORLG00000018584 Oryzias latipes ENSORLG00000018584 I
RUNX1 Oryzias latipes ENSORLG00000020699 I
RUNX1 Otolemur garnettii ENSOGAG00000033362 I
RUNX1 Pan troglodytes ENSPTRG00000013883 I
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I
ENSPFOG00000013752 Poecilia formosa ENSPFOG00000013752 I
Pvit_01165 Pogona vitticeps Pvit_01165 I
Pvit_04762 Pogona vitticeps Pvit_04762 I
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I
RUNX1 Procavia capensis ENSPCAG00000016747 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Rattus norvegicus ENSRNOG00000001704 I
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I
runx3 Takifugu rubripes ENSTRUG00000001517 I
frrunt Takifugu rubripes ENSTRUG00000006274 N
runx1 Takifugu rubripes ENSTRUG00000012611 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
RUNX2 Tupaia belangeri ENSTBEG00000000948 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
Tal_R011874 Tyto alba Tal_R011874 I
runx1.L Xenopus laevis XB-GENE-864949 I
runx3 Xenopus tropicalis XB-GENE-487784 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I
XP_002939388 Xenopus tropicalis XP_002939388 I
ENSXMAG00000006715 Xiphophorus maculatus ENSXMAG00000006715 I
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I