OB06G29250 (Oryza brachyantha)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 OB06G29250 T015318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.724 0.824
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.629 0.765
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB06G29250.1 ARID/BRIGHT 175 260

Links

Other ARID/BRIGHT family TFs
Other Oryza brachyantha TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AGL091W Ashbya gossypii AGOS_AGL091W I
Ecym_4144 Eremothecium cymbalariae Ecym_4144 I
KNAG_0A02550 Kazachstania naganishii KNAG_0A02550 I
KLTH0F07854g Kluyveromyces thermotolerans KLTH0F07854g I
Kwal_3122 Kluyveromyces waltii Kwal_3122 I
SAKL0H13024g Lachancea kluyveri SAKL0H13024g I
LALA0_S12e02300g Lachancea lanzarotensis LALA0_S12e02300g N
KLTH0F07854g Lachancea thermotolerans KLTH0F07854g I
NDAI_0E03460 Naumovozyma dairenensis NDAI_0E03460 I
PDE_08065 Penicillium oxalicum PDE_08065 N
SU7_2615 Saccharomyces arboricola SU7_2615 I
17002_YLR228C Saccharomyces bayanus 17002_YLR228C I
4515_Multiple Saccharomyces bayanus 4515_Multiple I
Scas_Contig679.26 Saccharomyces castellii Scas_Contig679.26 I
UPC2 Saccharomyces cerevisiae YDR213W D
4123_Multiple Saccharomyces mikatae 4123_Multiple I
4533_YDR213W Saccharomyces paradoxus 4533_YDR213W I
AACERI_AaceriAGL091W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL091W I
Kpol_529p15 Vanderwaltozyma polyspora Kpol_529p15 N
ZBAI_01680 Zygosaccharomyces bailii ZBAI_01680 N
ZBAI_09613 Zygosaccharomyces bailii ZBAI_09613 I