Sb04g029990 (Sorghum bicolor)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Sb04g029990 T015558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g029990.1 ARID/BRIGHT 182 267
Sb04g029990.2 ARID/BRIGHT 182 267

Links

Other ARID/BRIGHT family TFs
Other Sorghum bicolor TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_53526 Hordeum vulgare MLOC_53526 N
ORGLA03G0371300 Oryza glaberrima ORGLA03G0371300 N
OGLUM03G40140 Oryza glumaepatula OGLUM03G40140 N
BGIOSGA013905 Oryza indica BGIOSGA013905 N
OLONG_012144 Oryza longistaminata OLONG_012144 N
OMERI03G37110 Oryza meridionalis OMERI03G37110 N
ONIVA03G42150 Oryza nivara ONIVA03G42150 N
ORUFI03G42070 Oryza rufipogon ORUFI03G42070 N
OS03G0838800 Oryza sativa OS03G0838800 N
Traes_5BL_BA26BA910 Triticum aestivum Traes_5BL_BA26BA910 N
TRIUR3_27533 Triticum urartu TRIUR3_27533 N
GRMZM2G470422 Zea mays GRMZM2G470422 N