Tal_R007047 (Tyto alba)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Tal_R007047 T015941_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.785 1.000
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.785 1.000
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.785 1.000
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.785 1.000
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.632 0.744
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.632 0.744
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.605 0.605
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.482 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R007047 ARID/BRIGHT 230 316

Links

Other ARID/BRIGHT family TFs
Other Tyto alba TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_08298 Ancylostoma caninum ANCCAN_08298 N
ANCCEY_06495 Ancylostoma ceylanicum ANCCEY_06495 N
ANCDUO_13479 Ancylostoma duodenale ANCDUO_13479 N
ACOC_0000165301 Angiostrongylus costaricensis ACOC_0000165301 N
ASIM_0001210001 Anisakis simplex ASIM_0001210001 N
ASIM_0001432701 Anisakis simplex ASIM_0001432701 N
ALUE_0000981201 Ascaris lumbricoides ALUE_0000981201 N
ASU_13374 Ascaris suum ASU_13374 N
ASU_03242 Ascaris suum ASU_03242 N
Bm3947 Brugia malayi Bm3947 N
BTMF_0000795401 Brugia timori BTMF_0000795401 N
CBG12345 Caenorhabditis briggsae CBG12345 N
tlf-1 Caenorhabditis elegans WBGene00006577 N
DICVIV_11308 Dictyocaulus viviparus DICVIV_11308 N
nDi.2.2.2.g05314 Dirofilaria immitis nDi.2.2.2.g05314 N
DME_0000578001 Dracunculus medinensis DME_0000578001 N
EEL_0000453801 Elaeophora elaphi EEL_0000453801 N
EVEC_0000523501 Enterobius vermicularis EVEC_0000523501 N
GPUH_0001715901 Gongylonema pulchrum GPUH_0001715901 N
HCOI00597600 Haemonchus contortus HCOI00597600 N
HPBE_0000675601 Heligmosomoides bakeri HPBE_0000675601 N
Hba_19518 Heterorhabditis bacteriophora Hba_19518 N
nLs.2.1.2.g03126 Litomosoides sigmodontis nLs.2.1.2.g03126 N
LOAG_02128 Loa loa LOAG_02128 N
OESDEN_02210 Oesophagostomum dentatum OESDEN_02210 N
OFLC_0000425901 Onchocerca flexuosa OFLC_0000425901 N
nOo.2.0.1.g03279 Onchocerca ochengi nOo.2.0.1.g03279 N
WBGene00238395 Onchocerca volvulus WBGene00238395 N
scaffold259-EXSNAP2012.8 Pristionchus exspectatus scaffold259-EXSNAP2012.8 N
Ppa-tlf-1 Pristionchus pacificus PPA12059 N
L596_g17870 Steinernema carpocapsae L596_g17870 N
L892_g21047 Steinernema scapterisci L892_g21047 N
SMUV_0000869101 Syphacia muris SMUV_0000869101 N
TCNE_0000853601 Toxocara canis TCNE_0000853601 N
WUBG_01280 Wuchereria bancrofti WUBG_01280 N