Sakowv30045241m.g (Saccoglossus kowalevskii)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Sakowv30045241m.g T016048_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23954957_peptide ARID/BRIGHT 785 868
23954958_peptide ARID/BRIGHT 785 868

Links

Other ARID/BRIGHT family TFs
Other Saccoglossus kowalevskii TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00016p00083040 Amborella trichopoda AMTR_s00016p00083040 I 0.000
Aquca_043_00044 Aquilegia coerulea Aquca_043_00044 I 0.000
LFY Arabidopsis lyrata Al_scaffold_0008_2690 I 0.000
LFY Arabidopsis thaliana AT5G61850 D 0.000
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.000
BRADI5G20340 Brachypodium distachyon BRADI5G20340 I 0.000
Bo2g161690 Brassica oleracea Bo2g161690 I 0.000
Bo3g109270 Brassica oleracea Bo3g109270 I 0.000
Bra019619 Brassica rapa Bra019619 I 0.000
Bra029305 Brassica rapa Bra029305 I 0.000
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.000
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.000
Ca_01386 Cicer arietinum Ca_01386 I 0.000
Cla019619 Citrullus lanatus Cla019619 I 0.000
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.000
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.000
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.000
Eucgr.K02192 Eucalyptus grandis Eucgr.K02192 I 0.000
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.000
gene33406-v1.0-hybrid Fragaria vesca gene33406-v1.0-hybrid I 0.000
gene30683-v1.0-hybrid Fragaria vesca gene30683-v1.0-hybrid I 0.000
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.000
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.000
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.000
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.000
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.000
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.000
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.000
mgf020579m Mimulus guttatus mgf020579m I 0.000
mgf013601m Mimulus guttatus mgf013601m I 0.000
GSMUA_Achr6G16390_001 Musa acuminata GSMUA_Achr6G16390_001 I 0.000
OBART04G23870 Oryza barthii OBART04G23870 I 0.000
OB04G30790 Oryza brachyantha OB04G30790 I 0.000
ORGLA04G0204600 Oryza glaberrima ORGLA04G0204600 I 0.000
OGLUM04G23830 Oryza glumaepatula OGLUM04G23830 I 0.000
OSL Oryza indica BGIOSGA014428 I 0.000
OLONG_021167 Oryza longistaminata OLONG_021167 I 0.000
OMERI04G19760 Oryza meridionalis OMERI04G19760 I 0.000
ONIVA04G23030 Oryza nivara ONIVA04G23030 I 0.000
OPUNC04G21410 Oryza punctata OPUNC04G21410 I 0.000
ORUFI04G25610 Oryza rufipogon ORUFI04G25610 I 0.000
FL Oryza sativa OS04G0598300 I 0.000
Pavir.Gb00795 Panicum virgatum Pavir.Gb00795 I 0.000
Pavir.Ga00621 Panicum virgatum Pavir.Ga00621 I 0.000
FL Populus trichocarpa POPTR_0015s11820 I 0.000
Pm024610 Prunus mume Pm024610 I 0.000
PRUPE_ppa006372mg Prunus persica PRUPE_ppa006372mg I 0.000
30147.m014401 Ricinus communis 30147.m014401 I 0.000
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.000
Si011756m.g Setaria italica Si011756m.g I 0.000
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.000
Sb06g027340 Sorghum bicolor Sb06g027340 I 0.000
TCM_014768 Theobroma cacao TCM_014768 I 0.000
Traes_2AL_83D0D0C3F Triticum aestivum Traes_2AL_83D0D0C3F I 0.000
Traes_2BL_8DEC0EFBF Triticum aestivum Traes_2BL_8DEC0EFBF I 0.000
LFY Vitis vinifera VIT_17s0000g00150 I 0.000
GRMZM2G180190 Zea mays GRMZM2G180190 I 0.000
GRMZM2G098813 Zea mays GRMZM2G098813 I 0.000