CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000112301
(
Gongylonema pulchrum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
GPUH_0000112301
T016551_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000112301-mRNA-1
ARID/BRIGHT
11
92
CRFFKHFNFQGDPITQVPQVSKQIVDLHRLYLAVMKRGGFEQVTRDKTWKQICSEANSEMSESSAAGYQLRKHYQRHLLRLE
Links
Other
ARID/BRIGHT
family TFs
Other
Gongylonema pulchrum
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
Bo01495s010
Brassica oleracea
Bo01495s010
N
Bo4g112590
Brassica oleracea
Bo4g112590
N
Bra014654
Brassica rapa
Bra014654
N
Bra014657
Brassica rapa
Bra014657
N
Bra014658
Brassica rapa
Bra014658
N
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
Pm028949
Prunus mume
Pm028949
N