CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400008936
(
Solanum tuberosum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
PGSC0003DMG400008936
T020710_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400023077
B3
29
142
FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGNNNNNTNNNDGGTEKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVLFDRHRSESDRLFIGWRRRN
PGSC0003DMT400023078
B3
38
151
FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGNNNNNTNNNDGGTEKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVLFDRHRSESDRLFIGWRRRN
Links
Other
B3
family TFs
Other
Solanum tuberosum
TFs
307 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2C
Arabidopsis lyrata
scaffold_402826.1
I
0.000
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.000
Bra017011
Brassica rapa
Bra017011
I
0.000
PK07402.1
Cannabis sativa
PK07402.1
D
0.000
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.000
Ca_12446
Cicer arietinum
Ca_12446
I
0.000
Cla006713
Citrullus lanatus
Cla006713
I
0.000
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.000
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.000
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.000
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.000
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.000
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.000
GLYMA14G06080
Glycine max
GLYMA14G06080
I
0.000
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.000
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.000
mgf007881m
Mimulus guttatus
mgf007881m
I
0.000
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.000
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.000
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.000
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
0.000
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.000
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.000
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
Pm003634
Prunus mume
Pm003634
I
0.000
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
29729.m002292
Ricinus communis
29729.m002292
I
0.000
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.000
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.000
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.000
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.000
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.000
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.000
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.000
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.000
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.000