CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
chr3.LjT23H01.130.nc
(
Lotus japonicus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
chr3.LjT23H01.130.nc
T024395_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.LjT23H01.130.nc
B3
6
99
FYKLVLPSTVQAKQLRLPDNFMRKYGGELSPFATLSVPDGSVWRVGLKKADNKSWLVDGWQEFVQRYSIGVGYLLVFRYEGKSSFNVNILATSE
chr3.LjT23H01.130.nc
B3
292
387
CRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQTSDGRQWPVRCLYRGGRAKLSQGWFEFALDNNLGEGDVCVFELLKVKDVALQVTLFRVT
Links
Other
B3
family TFs
Other
Lotus japonicus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK10791.1
Cannabis sativa
PK10791.1
I
0.704
Ca_13671
Cicer arietinum
Ca_13671
N
0.852
Ca_14825
Cicer arietinum
Ca_14825
N
0.794
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.751
GLYMA11G13210
Glycine max
GLYMA11G13210
N
0.852
GLYMA12G05250
Glycine max
GLYMA12G05250
N
0.831
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.751
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.757
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.757
MTR_1g034240
Medicago truncatula
MTR_1g034240
N
0.767
MTR_4g068320
Medicago truncatula
MTR_4g068320
N
0.794
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.720
29851.m002498
Ricinus communis
29851.m002498
I
0.709