CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G01130
(
Glycine max
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GLYMA20G01130
T019355_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G01130.1
B3
5
98
CFHKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPDGSVWRIGLKKADNRILFVDGWQDFVQHYSIGVGYFLVFMYEGNSSFIVHIFNLS
GLYMA20G01130.1
B3
298
393
CRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQLSNGRQWSVRCLYRGGRAKLSQGWFEFTVENNLGEGDVCVFELLRTKEVVLQVTVFRVT
Links
Other
B3
family TFs
Other
Glycine max
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.968
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.889
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.873
Ca_14825
Cicer arietinum
Ca_14825
N
0.821
MTR_1g034240
Medicago truncatula
MTR_1g034240
N
0.815
GLYMA12G05250
Glycine max
GLYMA12G05250
N
0.783
Pm021537
Prunus mume
Pm021537
N
0.780
GLYMA11G13210
Glycine max
GLYMA11G13210
N
0.779
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.779
Cla010445
Citrullus lanatus
Cla010445
I
0.764
MDP0000238744
Malus domestica
MDP0000238744
N
0.758
MTR_1g034210
Medicago truncatula
MTR_1g034210
N
0.757
PK10791.1
Cannabis sativa
PK10791.1
I
0.757
chr3.LjT23H01.130.nc
Lotus japonicus
chr3.LjT23H01.130.nc
N
0.751
TCM_006971
Theobroma cacao
TCM_006971
I
0.750
Ca_13671
Cicer arietinum
Ca_13671
N
0.746
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.742
MDP0000555456
Malus domestica
MDP0000555456
N
0.742
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.737
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.725
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.725
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.718
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.716
MTR_4g068320
Medicago truncatula
MTR_4g068320
N
0.714
29851.m002498
Ricinus communis
29851.m002498
I
0.714
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
0.707
POPTR_0004s15400
Populus trichocarpa
POPTR_0004s15400
I
0.704