CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000238744
(
Malus domestica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
MDP0000238744
T023642_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000238744
B3
5
98
YFHKLIVSSTLQAKQLRIPESFVQKFRNELSTIATLTVPDGHVWHVGVKKVDNKFWFHSGWQDFIEHYSIRVGYFLTFRHEGRSSFTVHIFNLK
MDP0000238744
B3
300
394
CRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQSADGRQWSVRCLYRGGRAKLSQGWYEFTMDNNLGEGDVCVFELLKMKDIVLKVTVFRV
Links
Other
B3
family TFs
Other
Malus domestica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000555456
Malus domestica
MDP0000555456
N
0.947
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.862
Pm021537
Prunus mume
Pm021537
N
0.855
PK10791.1
Cannabis sativa
PK10791.1
I
0.794
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.791
TCM_006971
Theobroma cacao
TCM_006971
I
0.782
Cla010445
Citrullus lanatus
Cla010445
I
0.782
29851.m002498
Ricinus communis
29851.m002498
I
0.772
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.767
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.767
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.758
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.757
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.753
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.745
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.741
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.737
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.735
Cucsa.110000
Cucumis sativus
Cucsa.110000
N
0.715
SapurV1A.0090s0340
Salix purpurea
SapurV1A.0090s0340
I
0.714
Ca_14825
Cicer arietinum
Ca_14825
N
0.709
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
0.707
POPTR_0009s11170
Populus trichocarpa
POPTR_0009s11170
I
0.704