CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla016126
(
Citrullus lanatus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cla016126
T024779_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla016126
BBR
1
313
MDDGRQHENGRHKLDYFRGGPSPWNMVPPHHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKNDALAARDEALRQRDEALAQRDSALMERDNALAALEIRDNASNFPLGGGIQRKTKRLHHLSNHMPNMSETPYGTKDVHITDAFPITVIASEAVKSQQGKRIKDNKSVSSKTSKLPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLISFDDSSMPAPICSCTGLARQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Links
Other
BBR
family TFs
Other
Citrullus lanatus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK01854.1
Cannabis sativa
PK01854.1
N
0.744
Cucsa.382200
Cucumis sativus
Cucsa.382200
N
0.949
gene01678-v1.0-hybrid
Fragaria vesca
gene01678-v1.0-hybrid
N
0.718
MDP0000236732
Malus domestica
MDP0000236732
N
0.722
MDP0000517554
Malus domestica
MDP0000517554
N
0.740
MDP0000802164
Malus domestica
MDP0000802164
N
0.740
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
Pm021667
Prunus mume
Pm021667
N
0.744
PRUPE_ppa008471mg
Prunus persica
PRUPE_ppa008471mg
N
0.740
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000