CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PK01854.1
(
Cannabis sativa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
PK01854.1
T024911_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK01854.1
BBR
26
338
MDDGRHHETSRHKVDYYRASHSPWNMMAPHQVKEPNALVMNKKIMSIIAERDAAIRERNAAVSEKNEALAERDEARRQRDEVMAQRDSALLERDNALAALQVRNSSMSVTLCGGVQRGVKRTNHPSTHMPNMALATYDSKETQITDAFPITVISSDAIKSPQTKRPKVNKGHSSRESKPPRKKVAEDLNRRATSDGTKYRTEWDSQDVGLNLITFDESIMPVPVCSCTGVSRQCYKWGSGGWQSSCCTTNMSMYPLPQIPNKRHARMGGRKMSGSVFTRLLSRLAAQGHDLSIPLDLREYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Cannabis sativa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_05693
Cicer arietinum
Ca_05693
N
0.714
Cla016126
Citrullus lanatus
Cla016126
N
0.744
Cucsa.382200
Cucumis sativus
Cucsa.382200
N
0.729
gene01678-v1.0-hybrid
Fragaria vesca
gene01678-v1.0-hybrid
N
0.744
GLYMA05G38430
Glycine max
GLYMA05G38430
N
0.707
GLYMA08G01240
Glycine max
GLYMA08G01240
N
0.703
MDP0000236732
Malus domestica
MDP0000236732
N
0.755
MDP0000517554
Malus domestica
MDP0000517554
N
0.773
MDP0000802164
Malus domestica
MDP0000802164
N
0.773
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Pm021667
Prunus mume
Pm021667
N
0.758
PRUPE_ppa008471mg
Prunus persica
PRUPE_ppa008471mg
N
0.755