CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra83594
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra83594
T027289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra83594
BED ZF
77
122
SFIWDYFVKDASGKFVICTLCPSQTTRFAYSGGTSTMNRHLRKKHH
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_077410
Albugo laibachii
ALNC14_077410
N
0.814
fgenesh_scip_prom.28083.6775
Phytophthora lateralis
fgenesh_scip_prom.28083.6775
N
1.000
F443_15086
Phytophthora parasitica
F443_15086
N
0.953
Physo135098
Phytophthora sojae
Physo135098
N
0.977
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
Pythium aphanidermatum
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
N
0.814
maker-par_contig_36-snap-gene-0.22
Pythium arrhenomanes
maker-par_contig_36-snap-gene-0.22
N
0.884
PYU1_G009725
Pythium ultimum
PYU1_G009725
N
0.837
snap_masked-pve_contig_1278-abinit-gene-0.3
Pythium vexans
snap_masked-pve_contig_1278-abinit-gene-0.3
N
0.814