CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g008820
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb04g008820
T027595_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g008820.1
BED ZF
21
69
DVGWEYGVLVDASNKDKVKCKLCDKEMKGGIYRLKEHLAHEGKNVKKCP
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10002303m.g
Eutrema salsugineum
Thhalv10002303m.g
N
0.703
gene04769-v1.0-hybrid
Fragaria vesca
gene04769-v1.0-hybrid
N
0.714
MDP0000750292
Malus domestica
MDP0000750292
N
0.707
MDP0000207354
Malus domestica
MDP0000207354
N
0.707
Pavir.J25423
Panicum virgatum
Pavir.J25423
N
0.738
Pavir.J15543
Panicum virgatum
Pavir.J15543
N
0.810
Pavir.J10621
Panicum virgatum
Pavir.J10621
N
0.738
Pavir.J08193
Panicum virgatum
Pavir.J08193
N
0.738
Pavir.Ib02562
Panicum virgatum
Pavir.Ib02562
N
0.905
Pavir.Hb01581
Panicum virgatum
Pavir.Hb01581
N
0.833
Pavir.Hb01043
Panicum virgatum
Pavir.Hb01043
N
0.881
Pavir.Cb01025
Panicum virgatum
Pavir.Cb01025
N
0.714
Pavir.Ba00900
Panicum virgatum
Pavir.Ba00900
N
0.929
Pavir.Ab01384
Panicum virgatum
Pavir.Ab01384
N
0.833
Sb01g024553
Sorghum bicolor
Sb01g024553
N
0.833
Sb10g011520
Sorghum bicolor
Sb10g011520
N
0.786
Sb08g005616
Sorghum bicolor
Sb08g005616
N
0.769
Sb07g014876
Sorghum bicolor
Sb07g014876
N
0.810
Sb05g007535
Sorghum bicolor
Sb05g007535
N
0.881
Sb05g004780
Sorghum bicolor
Sb05g004780
N
0.857
Sb04g017410
Sorghum bicolor
Sb04g017410
N
0.810
Sb02g013136
Sorghum bicolor
Sb02g013136
N
0.881
Sb02g011140
Sorghum bicolor
Sb02g011140
N
0.786
Sb01g047190
Sorghum bicolor
Sb01g047190
N
0.786
Sb01g027440
Sorghum bicolor
Sb01g027440
N
0.786
Sb01g013490
Sorghum bicolor
Sb01g013490
N
0.769
GRMZM2G362557
Zea mays
GRMZM2G362557
N
0.905
GRMZM2G454472
Zea mays
GRMZM2G454472
N
0.786