CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-pve_contig_1278-abinit-gene-0.3
(
Pythium vexans
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
snap_masked-pve_contig_1278-abinit-gene-0.3
T027693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000023510
BED ZF
5
50
SFIWDFFVKDTTGKFVICTLCAEPAARFAYSGGTSTMNRHLRKKHH
Links
Other
BED ZF
family TFs
Other
Pythium vexans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_077410
Albugo laibachii
ALNC14_077410
N
0.767
fgenesh_scip_prom.28083.6775
Phytophthora lateralis
fgenesh_scip_prom.28083.6775
N
0.814
F443_15086
Phytophthora parasitica
F443_15086
N
0.791
Phyra83594
Phytophthora ramorum
Phyra83594
N
0.814
Physo135098
Phytophthora sojae
Physo135098
N
0.814
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
Pythium aphanidermatum
snap_masked-pag1_scaffold_1279-abinit-gene-0.4
N
0.721
maker-par_contig_36-snap-gene-0.22
Pythium arrhenomanes
maker-par_contig_36-snap-gene-0.22
N
0.767
PYU1_G009725
Pythium ultimum
PYU1_G009725
N
0.721