twist2 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000078266 T033729_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.883 0.882
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.883 0.882
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.883 0.882
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.883 0.882
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.883 0.882
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.883 0.882
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.883 0.882
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.879 0.941
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.879 0.941
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.879 0.941
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.879 0.941
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.879 0.941
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.879 0.941
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000102619 bHLH 70 120

Links

Other bHLH family TFs
Other Danio rerio TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI009244 Acyrthosiphon pisum ACYPI009244 I
AAEL002423 Aedes aegypti AAEL002423 I
ENSAMEG00000014235 Ailuropoda melanoleuca ENSAMEG00000014235 I
Alligator_sinensis_CCG007905.1 Alligator sinensis Alligator_sinensis_CCG007905.1 I
AALB002515 Anopheles albimanus AALB002515 I
AARA005336 Anopheles arabiensis AARA005336 I
AGAP004386 Anopheles gambiae AGAP004386 I
GB46056 Apis mellifera GB46056 I
ENSAMXG00000025833 Astyanax mexicanus ENSAMXG00000025833 I
ACEP24088 Atta cephalotes ACEP24088 I
ENSP00000352565-D1 Bos grunniens ENSP00000352565-D1 I
HAND2 Bos taurus ENSBTAG00000044123 I
estExt_fgenesh2_pm.C_20027 Branchiostoma floridae estExt_fgenesh2_pm.C_20027 I
e_gw.829.7.1 Branchiostoma floridae e_gw.829.7.1 I
HAND2 Callithrix jacchus ENSCJAG00000005144 I
Aan_R004859 Calypte anna Aan_R004859 I
Cflo_05798--XP_001122645.1_APIME Camponotus floridanus Cflo_05798--XP_001122645.1_APIME I
HAND2 Canis familiaris ENSCAFG00000007858 I
ENSCPOG00000001740 Cavia porcellus ENSCPOG00000001740 I
Cmyd_10016492 Chelonia mydas Cmyd_10016492 I
ENSCSAG00000003094 Chlorocebus sabaeus ENSCSAG00000003094 I
CLEC007932 Cimex lectularius CLEC007932 I
CGI_10023955 Crassostrea gigas CGI_10023955 I
CpipJ_CPIJ009732 Culex pipiens CpipJ_CPIJ009732 I
CPIJ009732 Culex quinquefasciatus CPIJ009732 I
hand2 Danio rerio ENSDARG00000008305 I
HAND2 Dasypus novemcinctus ENSDNOG00000035702 I
Hand2 Dipodomys ordii ENSDORG00000007304 I
HAND2 Equus caballus ENSECAG00000009657 I
HAND2 Felis catus ENSFCAG00000031585 I
ENSFALG00000011490 Ficedula albicollis ENSFALG00000011490 I
ENSGMOG00000018978 Gadus morhua ENSGMOG00000018978 I
hand2 Gasterosteus aculeatus ENSGACG00000016418 I
Gfo_R010505 Geospiza fortis Gfo_R010505 I
HAND2 Gorilla gorilla ENSGGOG00000006147 I
HHAL010291-PA Halyomorpha halys HHAL010291-PA I
Hsal_12649--XP_001122645.1_APIME Harpegnathos saltator Hsal_12649--XP_001122645.1_APIME I
HAND2 Homo sapiens ENSG00000164107 D
ENSSTOG00000023020 Ictidomys tridecemlineatus ENSSTOG00000023020 I
ISCW009436 Ixodes scapularis ISCW009436 I
ENSLACG00000004329 Latimeria chalumnae ENSLACG00000004329 I
ENSLOCG00000013581 Lepisosteus oculatus ENSLOCG00000013581 I
ENSLOCG00000012444 Lepisosteus oculatus ENSLOCG00000012444 I
LotgiG104540 Lottia gigantea LotgiG104540 I
HAND2 Loxodonta africana ENSLAFG00000029843 I
LLOJ007342 Lutzomyia longipalpis LLOJ007342 I
ENSMMUG00000018749 Macaca mulatta ENSMMUG00000018749 I
ENSMEUG00000010715 Macropus eugenii ENSMEUG00000010715 I
HAND2 Microcebus murinus ENSMICG00000009054 I
HAND2 Monodelphis domestica ENSMODG00000003548 I
ENSMPUG00000001909 Mustela putorius furo ENSMPUG00000001909 I
Hand2 Mus musculus ENSMUSG00000038193 I
HAND2 Myotis lucifugus ENSMLUG00000002599 I
NV12516 Nasonia vitripennis NV12516 I
ENSNLEG00000006670 Nomascus leucogenys ENSNLEG00000006670 I
HAND2 Ochotona princeps ENSOPRG00000010154 I
Ocbimv22024043m.g Octopus bimaculoides Ocbimv22024043m.g I
Ogr14661 Ophisaurus gracilis Ogr14661 I
ENSONIG00000016059 Oreochromis niloticus ENSONIG00000016059 I
ENSOCUG00000016256 Oryctolagus cuniculus ENSOCUG00000016256 I
hand2 Oryzias latipes ENSORLG00000010967 I
HAND2 Otolemur garnettii ENSOGAG00000027928 I
ENSOARG00000015352 Ovis aries ENSOARG00000015352 I
HAND2 Pan troglodytes ENSPTRG00000016601 I
ENSPANG00000023378 Papio anubis ENSPANG00000023378 I
PHUM088400 Pediculus humanus PHUM088400 I
PPAI010228 Phlebotomus papatasi PPAI010228 I
ENSPFOG00000009546 Poecilia formosa ENSPFOG00000009546 I
RPRC005573 Rhodnius prolixus RPRC005573 I
Sakowv30003804m.g Saccoglossus kowalevskii Sakowv30003804m.g I
ENSSHAG00000011188 Sarcophilus harrisii ENSSHAG00000011188 I
SINV12583 Solenopsis invicta SINV12583 I
SMAR011914 Strigamia maritima SMAR011914 I
SMAR012521 Strigamia maritima SMAR012521 I
ENSSSCG00000009703 Sus scrofa ENSSSCG00000009703 I
HAND2 Taeniopygia guttata ENSTGUG00000006281 I
tetur18g03540 Tetranychus urticae tetur18g03540 I
hand2 Tetraodon nigroviridis ENSTNIG00000005584 I
HAND2 Tupaia belangeri ENSTBEG00000007591 I
HAND2 Tursiops truncatus ENSTTRG00000001365 I
HAND2 Vicugna pacos ENSVPAG00000006724 I
hand2.S Xenopus laevis XB-GENE-6252408 I
hand2.L Xenopus laevis XB-GENE-865126 I
hand2 Xenopus tropicalis XB-GENE-481426 I
ENSXMAG00000015868 Xiphophorus maculatus ENSXMAG00000015868 I
L798_02599 Zootermopsis nevadensis L798_02599 I