CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSLOCG00000010058 *(Lepisosteus oculatus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSLOCG00000010058	T035026_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Mitf M01741_2.00	Mus musculus	NCDCGTGAYN	NRTCACGHGN	PBM Weirauch et al.(2014) pTH5465	0.914	1.000
MITF M08058_2.00	Homo sapiens	NNNDRTCACGTGAYHNNN	NNNDRTCACGTGAYHNNN	ChIP-seq Mathelier et al.(2014) MA0620.2	0.914	1.000
MITF M08740_2.00	Homo sapiens	YCAYGTGACH	DGTCACRTGR	Misc Kulakovskiy et al.(2013) MITF_HUMAN.H11MO.0.A	0.914	1.000
Mitf M08765_2.00	Mus musculus	BCHYGTGACY	RGTCACRDGV	Misc Kulakovskiy et al.(2013) MITF_MOUSE.H11MO.0.A	0.914	1.000
Mitf M09475_2.00	Mus musculus	GTCACRWGVB	VBCWYGTGAC	Misc Heinz et al.(2010) MastCells-MITF_GSE48085	0.914	1.000
MITF M09880_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MITF_Q4	0.914	1.000
MITF M09881_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MITF_Q6	0.914	1.000
Tfe3 M01715_2.00	Mus musculus	NCDCRTGAYN	NRTCAYGHGN	PBM Weirauch et al.(2014) pTH5057	0.914	0.981
Tfe3 M05833_2.00	Mus musculus	CACGTGAY	RTCACGTG	SMiLE-seq Isakova et al.(2017) TFE3	0.914	0.981
Tfe3 M08743_2.00	Mus musculus	TCACGTGACH	DGTCACGTGA	Misc Kulakovskiy et al.(2013) TFE3_MOUSE.H11MO.0.A	0.914	0.981
Tfe3 M09884_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFEA_01	0.914	0.981
TFE3 M02773_2.00	Homo sapiens	VNCACGTGMY	RKCACGTGNB	SELEX Jolma et al.(2013) TFE3_1	0.871	0.963
TFE3 M04058_2.00	Homo sapiens	YVCACGTGAYN	NRTCACGTGBR	SELEX Yin et al.(2017) TFE3_eDBD_HT-SELEX	0.871	0.963
TFE3 M08709_2.00	Homo sapiens	TCACGTGACH	DGTCACGTGA	Misc Kulakovskiy et al.(2013) TFE3_HUMAN.H11MO.0.B	0.871	0.963
TFE3 M09790_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFEA_Q6	0.871	0.963
TFE3 M04059_2.00	Homo sapiens	NRTCACATGBB	VVCATGTGAYN	SELEX Yin et al.(2017) TFE3_eDBD_Methyl-HT-SELEX	0.871	0.963
Tfec M00755_2.00	Mus musculus	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2013) pTH2885	0.870	0.926
Tfec M01736_2.00	Mus musculus	NCNCRTGVYN	NRBCAYGNGN	PBM Weirauch et al.(2014) pTH5065	0.870	0.926
TFEC M02778_2.00	Homo sapiens	RNCACRTGAB	VTCAYGTGNY	SELEX Jolma et al.(2013) TFEC_1	0.870	0.907
TFEC M04078_2.00	Homo sapiens	NVCACGTGACN	NGTCACGTGBN	SELEX Yin et al.(2017) TFEC_eDBD_HT-SELEX	0.870	0.907
TFEC M04079_2.00	Homo sapiens	VNCATGTGAYN	NRTCACATGNB	SELEX Yin et al.(2017) TFEC_eDBD_Methyl-HT-SELEX	0.870	0.907
Tfeb M01728_2.00	Mus musculus	CWCGTGAY	RTCACGWG	PBM Weirauch et al.(2014) pTH5072	0.855	0.889
TFEB M02781_2.00	Homo sapiens	RNCACGTGAY	RTCACGTGNY	SELEX Jolma et al.(2013) TFEB_1	0.855	0.889
TFEB M02727_2.00	Homo sapiens	RTCACGTGAY	RTCACGTGAY	SELEX Jolma et al.(2010) TFEB_dimer	0.855	0.889
TFEB M04088_2.00	Homo sapiens	YVCACGTGAYN	NRTCACGTGBR	SELEX Yin et al.(2017) TFEB_eDBD_HT-SELEX	0.855	0.889
TFEB M08718_2.00	Homo sapiens	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_HUMAN.H11MO.0.C	0.855	0.889
Tfeb M08753_2.00	Mus musculus	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_MOUSE.H11MO.0.C	0.855	0.889
TFEB M04089_2.00	Homo sapiens	VNCATGTGAYN	NRTCACATGNB	SELEX Yin et al.(2017) TFEB_eDBD_Methyl-HT-SELEX	0.855	0.889
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSLOCP00000012302	bHLH	294	347	KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ

Links
Other bHLH family TFs
Other *Lepisosteus oculatus* TFs

242 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000006258	Ailuropoda melanoleuca	ENSAMEG00000006258	N	0.000
ACUA024194	Anopheles culicifacies	ACUA024194	N	0.000
ADIR008028	Anopheles dirus	ADIR008028	N	0.000
AEPI000476	Anopheles epiroticus	AEPI000476	N	0.000
AFAF008223	Anopheles farauti	AFAF008223	N	0.000
AFUN008052	Anopheles funestus	AFUN008052	N	0.000
AMEM004763	Anopheles merus	AMEM004763	N	0.000
AMIN011274	Anopheles minimus	AMIN011274	N	0.000
ASTEI06908	Anopheles stephensi	ASTEI06908	N	0.000
Afo_R003276	Aptenodytes forsteri	Afo_R003276	N	0.000
ENSAMXG00000013350	Astyanax mexicanus	ENSAMXG00000013350	N	0.000
ENSAMXG00000003636	Astyanax mexicanus	ENSAMXG00000003636	N	0.000
ENSP00000306522-D1	Bos grunniens	ENSP00000306522-D1	N	0.000
ENSBTAP00000011330-D1	Bos grunniens	ENSBTAP00000011330-D1	N	0.000
CAMTA2	Bos taurus	ENSBTAG00000008591	N	0.000
fgenesh2_pg.scaffold_96000095	Branchiostoma floridae	fgenesh2_pg.scaffold_96000095	N	0.000
e_gw.96.31.1	Branchiostoma floridae	e_gw.96.31.1	N	0.000
CAMTA2	Callithrix jacchus	ENSCJAG00000011609	N	0.000
Aan_R005984	Calypte anna	Aan_R005984	N	0.000
CAMTA1	Canis familiaris	ENSCAFG00000019650	N	0.000
CAMTA2	Canis familiaris	ENSCAFG00000015674	N	0.000
CapteG124203	Capitella teleta	CapteG124203	N	0.000
CAMTA2	Cavia porcellus	ENSCPOG00000007319	N	0.000
ENSCSAG00000012903	Chlorocebus sabaeus	ENSCSAG00000012903	N	0.000
CGI_10022084	Crassostrea gigas	CGI_10022084	N	0.000
CpipJ_CPIJ003689	Culex pipiens	CpipJ_CPIJ003689	N	0.000
CPIJ003689	Culex quinquefasciatus	CPIJ003689	N	0.000
KGM_18441	Danaus plexippus	KGM_18441	N	0.000
camta1a	Danio rerio	ENSDARG00000077428	N	0.000
camta1b	Danio rerio	ENSDARG00000007824	N	0.000
CAMTA2	Dasypus novemcinctus	ENSDNOG00000036357	N	0.000
YQE_00136	Dendroctonus ponderosae	YQE_00136	N	0.000
Camta2	Dipodomys ordii	ENSDORG00000011763	N	0.000
CAMTA1	Equus caballus	ENSECAG00000020792	N	0.000
CAMTA2	Felis catus	ENSFCAG00000008698	N	0.000
ENSFCAG00000022960	Felis catus	ENSFCAG00000022960	N	0.000
ENSGMOG00000017650	Gadus morhua	ENSGMOG00000017650	N	0.000
ENSGALG00000000610	Gallus gallus	ENSGALG00000000610	N	0.000
camta1b	Gasterosteus aculeatus	ENSGACG00000007914	N	0.000
Gfo_R002636	Geospiza fortis	Gfo_R002636	N	0.000
CAMTA2	Gorilla gorilla	ENSGGOG00000009188	N	0.000
Hsal_08954--XP_001120489.1_APIME	Harpegnathos saltator	Hsal_08954--XP_001120489.1_APIME	N	0.000
CAMTA2	Homo sapiens	ENSG00000108509	N	0.000
ENSSTOG00000003897	Ictidomys tridecemlineatus	ENSSTOG00000003897	N	0.000
ISCW018640	Ixodes scapularis	ISCW018640	N	0.000
ENSLACG00000014574	Latimeria chalumnae	ENSLACG00000014574	N	0.000
ENSLOCG00000013712	Lepisosteus oculatus	ENSLOCG00000013712	N	0.000
CAMTA2	Loxodonta africana	ENSLAFG00000012042	N	0.000
ENSP00000321813	Macaca fascicularis	ENSP00000321813	N	0.000
CAMTA2	Macaca mulatta	ENSMMUG00000009176	N	0.000
CAMTA2	Microcebus murinus	ENSMICG00000012537	N	0.000
ENSMODG00000005842	Monodelphis domestica	ENSMODG00000005842	N	0.000
Camta2	Mus musculus	ENSMUSG00000040712	N	0.000
Myotis_brandtii_CAMTA2_10007480	Myotis brandtii	Myotis_brandtii_CAMTA2_10007480	N	0.000
CAMTA2	Myotis lucifugus	ENSMLUG00000014019	N	0.000
Ocbimv22002350m.g	Octopus bimaculoides	Ocbimv22002350m.g	N	0.000
Ogr01933	Ophisaurus gracilis	Ogr01933	N	0.000
ENSONIG00000019368	Oreochromis niloticus	ENSONIG00000019368	N	0.000
ENSOANG00000030450	Ornithorhynchus anatinus	ENSOANG00000030450	N	0.000
CAMTA2	Oryctolagus cuniculus	ENSOCUG00000001109	N	0.000
camta1b	Oryzias latipes	ENSORLG00000016337	N	0.000
CAMTA2	Otolemur garnettii	ENSOGAG00000014734	N	0.000
CAMTA1	Otolemur garnettii	ENSOGAG00000009792	N	0.000
ENSOARG00000004897	Ovis aries	ENSOARG00000004897	N	0.000
CAMTA2	Pan troglodytes	ENSPTRG00000023129	N	0.000
ENSPANG00000024316	Papio anubis	ENSPANG00000024316	N	0.000
PHUM466620	Pediculus humanus	PHUM466620	N	0.000
ENSPFOG00000004225	Poecilia formosa	ENSPFOG00000004225	N	0.000
ENSPFOG00000000859	Poecilia formosa	ENSPFOG00000000859	N	0.000
ENSPFOG00000016244	Poecilia formosa	ENSPFOG00000016244	N	0.000
ENSPPYG00000007853	Pongo abelii	ENSPPYG00000007853	N	0.000
CAMTA2	Pteropus vampyrus	ENSPVAG00000003768	N	0.000
Camta1	Rattus norvegicus	ENSRNOG00000018602	N	0.000
Camta2	Rattus norvegicus	ENSRNOG00000004283	N	0.000
CAMTA2	Sus scrofa	ENSSSCG00000017902	N	0.000
CAMTA1	Taeniopygia guttata	ENSTGUG00000002566	N	0.000
camta1b	Takifugu rubripes	ENSTRUG00000010941	N	0.000
camta1a	Takifugu rubripes	ENSTRUG00000013622	N	0.000
ENSTRUG00000000888	Takifugu rubripes	ENSTRUG00000000888	N	0.000
TC012001	Tribolium castaneum	TC012001	N	0.000
CAMTA2	Tursiops truncatus	ENSTTRG00000001303	N	0.000
L798_01998	Zootermopsis nevadensis	L798_01998	N	0.000

ENSLOCG00000010058 (Lepisosteus oculatus) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

242 Related TFs

ENSLOCG00000010058 **(Lepisosteus oculatus)
bHLH**