ENSONIG00000008337 (Oreochromis niloticus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSONIG00000008337 T036218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 0.962
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 0.962
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 0.962
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 0.962
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 0.962
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 0.962
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 0.962
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 0.962
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 0.962
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 0.962
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 0.962
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 0.962
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 0.962
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 0.962
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.846
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.846
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.846
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.923
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.923
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.923
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.923
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.923
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.923
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.923
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.923
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.885
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.885
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.885
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.885
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.885
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.885
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000010483 bHLH 406 459

Links

Other bHLH family TFs
Other Oreochromis niloticus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14723 Aegilops tauschii F775_14723 I 0.000
scaffold_700593.1 Arabidopsis lyrata scaffold_700593.1 I 0.000
ZAT3 Arabidopsis thaliana AT4G35280 I 0.000
Bostr.7867s1389 Boechera stricta Bostr.7867s1389 I 0.000
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.000
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.000
Bo7g117320 Brassica oleracea Bo7g117320 I 0.000
Bra017706 Brassica rapa Bra017706 I 0.000
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.000
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.000
LjSGA_020980.2 Lotus japonicus LjSGA_020980.2 I 0.000
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.000
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.000
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.000
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.000
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.000
BGIOSGA033523 Oryza indica BGIOSGA033523 N 0.000
BGIOSGA033525 Oryza indica BGIOSGA033525 N 0.000
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.000
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.000
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.000
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.000
OS01G0839100 Oryza sativa OS01G0839100 I 0.000
OS11G0702300 Oryza sativa OS11G0702300 N 0.000
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.000
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.000
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.000
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.000
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.000
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.000
Si003051m.g Setaria italica Si003051m.g I 0.000
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.000
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.000
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.000
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.000
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.000
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.000
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.000