atoh1a (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000004876 T036386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00 		Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074 		0.860 0.885
Atoh1
M02820_2.00 		Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1 		0.860 0.885
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.860 0.885
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.860 0.885
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.860 0.885
Atoh1
M08779_2.00 		Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B 		0.860 0.885
Atoh1
M09480_2.00 		Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111 		0.860 0.885
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.860 0.885
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.860 0.885
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.860 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006139 bHLH 140 192

Links

Other bHLH family TFs
Other Oryzias latipes TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I
Afo_R001109 Aptenodytes forsteri Afo_R001109 I
Afo_R013473 Aptenodytes forsteri Afo_R013473 I
ENSAMXG00000024918 Astyanax mexicanus ENSAMXG00000024918 I
HIC2 Bos taurus ENSBTAG00000005951 I
Brh_R005582 Buceros rhinoceros Brh_R005582 I
Aan_R003503 Calypte anna Aan_R003503 I
Aan_R008211 Calypte anna Aan_R008211 I
HIC2 Canis familiaris ENSCAFG00000032493 I
HIC1 Cavia porcellus ENSCPOG00000020382 I
HIC2 Cavia porcellus ENSCPOG00000001134 I
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I
hic2 Danio rerio ENSDARG00000100497 I
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I
HIC2 Equus caballus ENSECAG00000017997 I
HIC2 Felis catus ENSFCAG00000023903 I
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I
hic1l Gasterosteus aculeatus ENSGACG00000004268 I
hic1 Gasterosteus aculeatus ENSGACG00000010848 I
Gfo_R010813 Geospiza fortis Gfo_R010813 I
HIC2 Gorilla gorilla ENSGGOG00000006041 I
HIC2 Homo sapiens ENSG00000169635 D
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I
ENSLACG00000011864 Latimeria chalumnae ENSLACG00000011864 N
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I
ENSP00000384889 Macaca fascicularis ENSP00000384889 I
HIC2 Macaca mulatta ENSMMUG00000031089 N
HIC2 Meleagris gallopavo ENSMGAG00000000949 I
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I
HIC2 Microcebus murinus ENSMICG00000005154 I
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I
Hic1 Mus musculus ENSMUSG00000043099 D
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I
HIC2 Myotis lucifugus ENSMLUG00000009669 I
Ogr08090 Ophisaurus gracilis Ogr08090 I
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I
hic1 Oryzias latipes ENSORLG00000004895 I
hic1l Oryzias latipes ENSORLG00000002131 N
HIC2 Otolemur garnettii ENSOGAG00000030274 I
HIC2 Pan troglodytes ENSPTRG00000014112 I
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I
Pvit_18806 Pogona vitticeps Pvit_18806 I
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I
HIC2 Procavia capensis ENSPCAG00000015907 I
HIC2 Pteropus vampyrus ENSPVAG00000000111 I
Hic2 Rattus norvegicus ENSRNOG00000051458 I
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I
HIC2 Taeniopygia guttata ENSTGUG00000008699 I
HIC1 Taeniopygia guttata ENSTGUG00000005835 I
hic1l Takifugu rubripes ENSTRUG00000013139 I
hic1 Takifugu rubripes ENSTRUG00000004590 I
Tal_R003180 Tyto alba Tal_R003180 I
hic2.L Xenopus laevis XB-GENE-960047 N
XP_002937184 Xenopus tropicalis XP_002937184 I
hic2 Xenopus tropicalis XB-GENE-960044 I
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I