TCF12 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000007109 T037018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000012156 bHLH 602 655

Links

Other bHLH family TFs
Other Pan troglodytes TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 0.000
Alligator_sinensis_CCG005309.1 Alligator sinensis Alligator_sinensis_CCG005309.1 I 0.000
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I 0.000
Afo_R015662 Aptenodytes forsteri Afo_R015662 I 0.000
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I 0.000
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 0.000
NFKB1 Bos taurus ENSBTAG00000020270 I 0.000
Brh_R011794 Buceros rhinoceros Brh_R011794 I 0.000
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 0.000
Aan_R012729 Calypte anna Aan_R012729 I 0.000
NFKB1 Canis familiaris ENSCAFG00000010730 I 0.000
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 0.000
nfkb1 Danio rerio ENSDARG00000105261 I 0.000
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I 0.000
Nfkb1 Dipodomys ordii ENSDORG00000007447 I 0.000
NFKB1 Equus caballus ENSECAG00000015042 I 0.000
NFKB1 Felis catus ENSFCAG00000007557 I 0.000
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I 0.000
NFKB1 Gallus gallus ENSGALG00000012304 I 0.000
NFKB1 Gasterosteus aculeatus ENSGACG00000016876 I 0.000
Gfo_R000994 Geospiza fortis Gfo_R000994 I 0.000
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 0.000
NFKB1 Homo sapiens ENSG00000109320 D 0.000
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 0.000
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I 0.000
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.000
NFKB1 Loxodonta africana ENSLAFG00000009344 I 0.000
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 0.000
NFKB1 Macaca mulatta ENSMMUG00000003736 I 0.000
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 0.000
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I 0.000
NFKB1 Monodelphis domestica ENSMODG00000020672 I 0.000
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 0.000
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.000
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I 0.000
NFKB1 Myotis lucifugus ENSMLUG00000005986 I 0.000
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 0.000
NFKB1 Ochotona princeps ENSOPRG00000005212 I 0.000
Ogr10707 Ophisaurus gracilis Ogr10707 I 0.000
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I 0.000
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.000
ENSOANG00000022123 Ornithorhynchus anatinus ENSOANG00000022123 I 0.000
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 0.000
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 0.000
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 0.000
NFKB1 Pan troglodytes ENSPTRG00000016320 I 0.000
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I 0.000
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I 0.000
ENSPFOG00000016918 Poecilia formosa ENSPFOG00000016918 I 0.000
Pvit_05196 Pogona vitticeps Pvit_05196 I 0.000
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 0.000
NFKB1 Procavia capensis ENSPCAG00000008172 I 0.000
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 0.000
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I 0.000
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 0.000
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.000
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I 0.000
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 0.000
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 0.000
Tal_R004861 Tyto alba Tal_R004861 I 0.000
NFKB1 Vicugna pacos ENSVPAG00000000280 I 0.000
nfkb1.L Xenopus laevis XB-GENE-985749 I 0.000
nfkb1 Xenopus tropicalis XB-GENE-985746 I 0.000
ENSXMAG00000015369 Xiphophorus maculatus ENSXMAG00000015369 I 0.000