BHLHE40 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000011390 T037878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000028751 bHLH 49 103
ENSTRUP00000028752 bHLH 49 103
ENSTRUP00000028753 bHLH 49 103

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_051010 Acremonium chrysogenum ACRE_051010 N 0.000
BBA_03393 Beauveria bassiana BBA_03393 N 0.000
Bcin01g08080 Botrytis cinerea Bcin01g08080 N 0.000
A1O1_06448 Capronia coronata A1O1_06448 N 0.000
PV04_06890 Capronia semiimmersa PV04_06890 N 0.000
Z519_03993 Cladophialophora bantiana Z519_03993 N 0.000
G647_06053 Cladophialophora carrionii G647_06053 N 0.000
PV07_03724 Cladophialophora immunda PV07_03724 N 0.000
A1O5_08664 Cladophialophora psammophila A1O5_08664 N 0.000
A1O7_06479 Cladophialophora yegresii A1O7_06479 N 0.000
CPUR_04232 Claviceps purpurea CPUR_04232 N 0.000
CCM_00337 Cordyceps militaris CCM_00337 N 0.000
HMPREF1120_03961 Exophiala dermatitidis HMPREF1120_03961 N 0.000
PV10_08689 Exophiala mesophila PV10_08689 N 0.000
PV06_02579 Exophiala oligosperma PV06_02579 N 0.000
PV11_06703 Exophiala sideris PV11_06703 N 0.000
Z517_00960 Fonsecaea pedrosoi Z517_00960 N 0.000
FFUJ_04132 Fusarium fujikuroi FFUJ_04132 N 0.000
FGRRES_09277 Fusarium graminearum FGRRES_09277 N 0.000
FPSE_09669 Fusarium pseudograminearum FPSE_09669 N 0.000
NechaG66814 Fusarium solani NechaG66814 N 0.000
MBM_05804 Marssonina brunnea MBM_05804 N 0.000
MAC_08284 Metarhizium acridum MAC_08284 N 0.000
MAM_02763 Metarhizium album MAM_02763 N 0.000
MANI_026709 Metarhizium anisopliae MANI_026709 N 0.000
MBR_02363 Metarhizium brunneum MBR_02363 N 0.000
MGU_00675 Metarhizium guizhouense MGU_00675 N 0.000
MAJ_00301 Metarhizium majus MAJ_00301 N 0.000
X797_000370 Metarhizium robertsii X797_000370 N 0.000
estExt_Genewise1Plus.C_sca_18_chr2_1_02126 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_02126 N 0.000
OIDMADRAFT_41356 Oidiodendron maius OIDMADRAFT_41356 N 0.000
OCS_01259 Ophiocordyceps sinensis OCS_01259 N 0.000
GMDG_02083 Pseudogymnoascus destructans GMDG_02083 N 0.000
Z518_02769 Rhinocladiella mackenziei Z518_02769 N 0.000
SS1G_04655 Sclerotinia sclerotiorum SS1G_04655 N 0.000
SPBR_01645 Sporothrix brasiliensis SPBR_01645 N 0.000
HMPREF1624_03632 Sporothrix schenckii HMPREF1624_03632 N 0.000
S40285_06361 Stachybotrys chlorohalonata S40285_06361 N 0.000
VHEMI03871 Torrubiella hemipterigena VHEMI03871 N 0.000
TRIATDRAFT_298410 Trichoderma atroviride TRIATDRAFT_298410 N 0.000
TRIREDRAFT_65315 Trichoderma reesei TRIREDRAFT_65315 N 0.000
TRIVIDRAFT_208681 Trichoderma virens TRIVIDRAFT_208681 N 0.000