GRMZM2G024530 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G024530 T039824_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.863 0.521
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.863 0.521
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.863 0.521
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.863 0.521
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.857 0.625
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.847 0.458
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.846 0.854
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.846 0.812
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.843 0.500
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.843 0.500
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.843 0.500
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G024530_P01 bHLH 329 376

Links

Other bHLH family TFs
Other Zea mays TFs

395 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30957 Aegilops tauschii F775_30957 I
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.846
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.846
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.846
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.846
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.846
AT1G03040 Arabidopsis thaliana AT1G03040 N
BHLH66 Arabidopsis thaliana AT2G24260 I 0.846
UNE12 Arabidopsis thaliana AT4G02590 N
LRL2 Arabidopsis thaliana AT4G30980 D 0.846
BHLH82 Arabidopsis thaliana AT5G58010 I 0.846
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.846
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.846
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.846
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.846
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I
Bo01031s030 Brassica oleracea Bo01031s030 N
Bo1g011740 Brassica oleracea Bo1g011740 I 0.846
Bo2g028920 Brassica oleracea Bo2g028920 I 0.846
Bo2g100750 Brassica oleracea Bo2g100750 N
Bo3g018990 Brassica oleracea Bo3g018990 I 0.846
Bo4g154370 Brassica oleracea Bo4g154370 I 0.846
Bo5g003580 Brassica oleracea Bo5g003580 N
Bo8g099910 Brassica oleracea Bo8g099910 I 0.846
Bo9g005930 Brassica oleracea Bo9g005930 N
Bo9g133640 Brassica oleracea Bo9g133640 I 0.846
Bra000872 Brassica rapa Bra000872 N
Bra002679 Brassica rapa Bra002679 I 0.846
Bra006788 Brassica rapa Bra006788 I 0.846
Bra007863 Brassica rapa Bra007863 I 0.846
Bra011237 Brassica rapa Bra011237 I 0.846
Bra018539 Brassica rapa Bra018539 N
Bra020398 Brassica rapa Bra020398 I 0.846
Bra032111 Brassica rapa Bra032111 I 0.846
Bra033368 Brassica rapa Bra033368 N
Bra036256 Brassica rapa Bra036256 N
PK14040.1 Cannabis sativa PK14040.1 I 0.846
PK20184.1 Cannabis sativa PK20184.1 N
PK25419.1 Cannabis sativa PK25419.1 N
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.846
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.846
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.846
Carubv10001523m.g Capsella rubella Carubv10001523m.g N
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.846
Carubv10009831m.g Capsella rubella Carubv10009831m.g N
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.846
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.846
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.846
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N
Ca_03340 Cicer arietinum Ca_03340 I 0.846
Ca_03755 Cicer arietinum Ca_03755 N
Ca_07790 Cicer arietinum Ca_07790 N
Ca_12194 Cicer arietinum Ca_12194 N
Cla011475 Citrullus lanatus Cla011475 N
Cla013823 Citrullus lanatus Cla013823 I 0.846
Cla015040 Citrullus lanatus Cla015040 N
Cla019007 Citrullus lanatus Cla019007 I 0.846
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.846
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.846
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.846
Cucsa.289090 Cucumis sativus Cucsa.289090 N
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.846
Cucsa.388780 Cucumis sativus Cucsa.388780 N
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.846
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.846
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.846
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.846
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.846
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.846
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N
GLYMA02G16110 Glycine max GLYMA02G16110 N
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.846
GLYMA03G31510 Glycine max GLYMA03G31510 N
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.846
GLYMA10G03690 Glycine max GLYMA10G03690 N
GLYMA10G30430 Glycine max GLYMA10G30430 N
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.846
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.846
GLYMA19G34360 Glycine max GLYMA19G34360 N
GLYMA20G36770 Glycine max GLYMA20G36770 N
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.846
MLOC_13438 Hordeum vulgare MLOC_13438 I
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.846
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.846
LPERR03G31640 Leersia perrieri LPERR03G31640 I
LPERR07G04600 Leersia perrieri LPERR07G04600 I
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.846
Lus10006587.g Linum usitatissimum Lus10006587.g N
Lus10015909.g Linum usitatissimum Lus10015909.g N
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.846
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.846
MDP0000121522 Malus domestica MDP0000121522 I 0.846
MDP0000176749 Malus domestica MDP0000176749 N
MDP0000295593 Malus domestica MDP0000295593 N
MDP0000534784 Malus domestica MDP0000534784 I 0.846
MDP0000606021 Malus domestica MDP0000606021 I 0.859
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.846
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.846
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N
MTR_1g070870 Medicago truncatula MTR_1g070870 N
MTR_1g080890 Medicago truncatula MTR_1g080890 N
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.846
mgf001459m Mimulus guttatus mgf001459m I 0.846
mgf009435m Mimulus guttatus mgf009435m I 0.846
mgf014585m Mimulus guttatus mgf014585m I 0.846
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.846
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.846
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.846
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I
GSMUA_Achr5G16470_001 Musa acuminata GSMUA_Achr5G16470_001 I
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I
OBART03G37400 Oryza barthii OBART03G37400 I
OBART06G05420 Oryza barthii OBART06G05420 I 0.846
OBART07G05280 Oryza barthii OBART07G05280 I
OB06G14990 Oryza brachyantha OB06G14990 I 0.846
OB07G13990 Oryza brachyantha OB07G13990 I
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.846
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.846
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.846
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.846
BGIOSGA013729 Oryza indica BGIOSGA013729 I
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.846
BGIOSGA025266 Oryza indica BGIOSGA025266 I
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.846
OLONG_014165 Oryza longistaminata OLONG_014165 I
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.846
OMERI03G34570 Oryza meridionalis OMERI03G34570 I
OMERI05G15760 Oryza meridionalis OMERI05G15760 I
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.846
ONIVA03G38760 Oryza nivara ONIVA03G38760 I
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.846
ONIVA07G04020 Oryza nivara ONIVA07G04020 I
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.846
OPUNC03G34510 Oryza punctata OPUNC03G34510 I
OPUNC07G05040 Oryza punctata OPUNC07G05040 I
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.846
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.846
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I
OS03G0797600 Oryza sativa OS03G0797600 I
OS06G0184000 Oryza sativa OS06G0184000 I 0.846
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.846
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.846
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.846
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.846
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.846
Pavir.J00283 Panicum virgatum Pavir.J00283 I
Pavir.J03221 Panicum virgatum Pavir.J03221 I
Pavir.J04249 Panicum virgatum Pavir.J04249 I
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.846
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.846
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.846
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.846
Pm003525 Prunus mume Pm003525 N
Pm020229 Prunus mume Pm020229 N
Pm027715 Prunus mume Pm027715 I 0.846
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.846
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N
29598.m000464 Ricinus communis 29598.m000464 N
29737.m001209 Ricinus communis 29737.m001209 I 0.846
29883.m001988 Ricinus communis 29883.m001988 N
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.846
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.846
SELMODRAFT_24890 Selaginella moellendorffii SELMODRAFT_24890 I
SELMODRAFT_24892 Selaginella moellendorffii SELMODRAFT_24892 I
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.846
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.846
Si017553m.g Setaria italica Si017553m.g I 0.846
Si029708m.g Setaria italica Si029708m.g I 0.846
Si030704m.g Setaria italica Si030704m.g I
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.846
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.846
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.846
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N
Sb01g005130 Sorghum bicolor Sb01g005130 I
Sb02g004570 Sorghum bicolor Sb02g004570 I
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.846
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.846
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.846
TCM_004217 Theobroma cacao TCM_004217 N
TCM_026346 Theobroma cacao TCM_026346 N
TCM_037077 Theobroma cacao TCM_037077 I 0.846
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.846
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.846
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.846
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N
GRMZM2G004356 Zea mays GRMZM2G004356 I
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.846
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.846
GRMZM2G162382 Zea mays GRMZM2G162382 I
GRMZM2G350165 Zea mays GRMZM2G350165 I