CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA11G20620
(
Oryza nivara
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ONIVA11G20620
T042706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA11G20620.1
bHLH
175
223
KDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQ
Links
Other
bHLH
family TFs
Other
Oryza nivara
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_02125
Aegilops tauschii
F775_02125
N
F775_11253
Aegilops tauschii
F775_11253
N
AMTR_s00015p00239460
Amborella trichopoda
AMTR_s00015p00239460
N
AMTR_s00089p00043950
Amborella trichopoda
AMTR_s00089p00043950
N
Aquca_010_00112
Aquilegia coerulea
Aquca_010_00112
N
Aquca_037_00084
Aquilegia coerulea
Aquca_037_00084
N
SPCH
Arabidopsis lyrata
Al_scaffold_0008_1712
N
fgenesh2_kg.5__2692__AT3G61950.1
Arabidopsis lyrata
fgenesh2_kg.5__2692__AT3G61950.1
N
MUTE
Arabidopsis lyrata
scaffold_300691.1
N
MUTE
Arabidopsis thaliana
AT3G06120
N
BHLH67
Arabidopsis thaliana
AT3G61950
N
SPCH
Arabidopsis thaliana
AT5G53210
N
Bostr.13158s0200
Boechera stricta
Bostr.13158s0200
N
Bostr.2570s0048
Boechera stricta
Bostr.2570s0048
N
Bostr.26833s0957
Boechera stricta
Bostr.26833s0957
N
BRADI1G18400
Brachypodium distachyon
BRADI1G18400
N
BRADI1G38650
Brachypodium distachyon
BRADI1G38650
N
BRADI3G09670
Brachypodium distachyon
BRADI3G09670
N
BRADI3G52150
Brachypodium distachyon
BRADI3G52150
N
BRADI5G19950
Brachypodium distachyon
BRADI5G19950
N
Bo1g150080
Brassica oleracea
Bo1g150080
N
Bo2g046020
Brassica oleracea
Bo2g046020
N
Bo3g022850
Brassica oleracea
Bo3g022850
N
Bo3g060420
Brassica oleracea
Bo3g060420
N
Bo5g144750
Brassica oleracea
Bo5g144750
N
Bo6g114730
Brassica oleracea
Bo6g114730
N
Bo8g097470
Brassica oleracea
Bo8g097470
N
Bo9g055890
Brassica oleracea
Bo9g055890
N
Bo9g110960
Brassica oleracea
Bo9g110960
N
Bra001183
Brassica rapa
Bra001183
N
Bra003073
Brassica rapa
Bra003073
N
Bra007644
Brassica rapa
Bra007644
N
Bra020775
Brassica rapa
Bra020775
N
Bra022638
Brassica rapa
Bra022638
N
Bra027958
Brassica rapa
Bra027958
N
Bra029088
Brassica rapa
Bra029088
N
Bra040234
Brassica rapa
Bra040234
N
PK01904.1
Cannabis sativa
PK01904.1
N
Cagra.0084s0068
Capsella grandiflora
Cagra.0084s0068
N
Cagra.0483s0048
Capsella grandiflora
Cagra.0483s0048
N
Cagra.1772s0035
Capsella grandiflora
Cagra.1772s0035
N
Carubv10012751m.g
Capsella rubella
Carubv10012751m.g
N
Carubv10018614m.g
Capsella rubella
Carubv10018614m.g
N
Carubv10026630m.g
Capsella rubella
Carubv10026630m.g
N
evm.TU.supercontig_55.64
Carica papaya
evm.TU.supercontig_55.64
N
Ca_00615
Cicer arietinum
Ca_00615
N
Ca_03951
Cicer arietinum
Ca_03951
N
Ciclev10005947m.g
Citrus clementina
Ciclev10005947m.g
N
Ciclev10007150m.g
Citrus clementina
Ciclev10007150m.g
N
orange1.1g042904m.g
Citrus sinensis
orange1.1g042904m.g
N
Cucsa.254010
Cucumis sativus
Cucsa.254010
N
Eucgr.A02667
Eucalyptus grandis
Eucgr.A02667
N
Eucgr.H03591
Eucalyptus grandis
Eucgr.H03591
N
Thhalv10006045m.g
Eutrema salsugineum
Thhalv10006045m.g
N
Thhalv10013877m.g
Eutrema salsugineum
Thhalv10013877m.g
N
Thhalv10022251m.g
Eutrema salsugineum
Thhalv10022251m.g
N
GLYMA04G41710
Glycine max
GLYMA04G41710
N
GLYMA06G13081
Glycine max
GLYMA06G13081
N
GLYMA13G27880
Glycine max
GLYMA13G27880
N
GLYMA15G11130
Glycine max
GLYMA15G11130
N
Gorai.006G054300
Gossypium raimondii
Gorai.006G054300
N
Gorai.007G294800
Gossypium raimondii
Gorai.007G294800
N
Gorai.008G270700
Gossypium raimondii
Gorai.008G270700
N
MLOC_10595
Hordeum vulgare
MLOC_10595
N
MLOC_45114
Hordeum vulgare
MLOC_45114
N
MLOC_54435
Hordeum vulgare
MLOC_54435
N
MLOC_57631
Hordeum vulgare
MLOC_57631
N
MLOC_67091
Hordeum vulgare
MLOC_67091
N
MLOC_67417
Hordeum vulgare
MLOC_67417
N
LPERR02G09400
Leersia perrieri
LPERR02G09400
N
LPERR02G23260
Leersia perrieri
LPERR02G23260
N
LPERR03G05820
Leersia perrieri
LPERR03G05820
N
LPERR04G19210
Leersia perrieri
LPERR04G19210
N
LPERR05G23890
Leersia perrieri
LPERR05G23890
N
LPERR06G13950
Leersia perrieri
LPERR06G13950
N
Lus10010101.g
Linum usitatissimum
Lus10010101.g
N
Lus10010503.g
Linum usitatissimum
Lus10010503.g
N
Lus10012603.g
Linum usitatissimum
Lus10012603.g
N
Lus10014938.g
Linum usitatissimum
Lus10014938.g
N
Lus10034031.g
Linum usitatissimum
Lus10034031.g
N
chr6.CM0139.250.nd
Lotus japonicus
chr6.CM0139.250.nd
N
MDP0000229007
Malus domestica
MDP0000229007
N
cassava11522.m1
Manihot esculenta
cassava11522.m1
N
cassava32469.m1
Manihot esculenta
cassava32469.m1
N
cassava3377.m1
Manihot esculenta
cassava3377.m1
N
cassava7222.valid.m1
Manihot esculenta
cassava7222.valid.m1
N
MTR_2g022280
Medicago truncatula
MTR_2g022280
N
MTR_3g090850
Medicago truncatula
MTR_3g090850
N
MTR_5g064950
Medicago truncatula
MTR_5g064950
N
mgf011108m
Mimulus guttatus
mgf011108m
N
mgf014552m
Mimulus guttatus
mgf014552m
N
GSMUA_Achr10G01060_001
Musa acuminata
GSMUA_Achr10G01060_001
N
GSMUA_Achr10G30300_001
Musa acuminata
GSMUA_Achr10G30300_001
N
GSMUA_Achr11G00350_001
Musa acuminata
GSMUA_Achr11G00350_001
N
GSMUA_Achr11G23340_001
Musa acuminata
GSMUA_Achr11G23340_001
N
GSMUA_Achr2G06030_001
Musa acuminata
GSMUA_Achr2G06030_001
N
GSMUA_Achr2G22310_001
Musa acuminata
GSMUA_Achr2G22310_001
N
GSMUA_Achr5G17900_001
Musa acuminata
GSMUA_Achr5G17900_001
N
GSMUA_Achr6G10290_001
Musa acuminata
GSMUA_Achr6G10290_001
N
GSMUA_Achr7G12790_001
Musa acuminata
GSMUA_Achr7G12790_001
N
GSMUA_Achr7G21110_001
Musa acuminata
GSMUA_Achr7G21110_001
N
GSMUA_Achr7G21190_001
Musa acuminata
GSMUA_Achr7G21190_001
N
GSMUA_Achr8G19870_001
Musa acuminata
GSMUA_Achr8G19870_001
N
GSMUA_Achr8G28400_001
Musa acuminata
GSMUA_Achr8G28400_001
N
OBART02G11110
Oryza barthii
OBART02G11110
N
OBART02G28630
Oryza barthii
OBART02G28630
N
OBART02G33270
Oryza barthii
OBART02G33270
N
OBART03G06470
Oryza barthii
OBART03G06470
N
OBART04G23490
Oryza barthii
OBART04G23490
N
OBART05G27490
Oryza barthii
OBART05G27490
N
OBART05G28280
Oryza barthii
OBART05G28280
N
OBART06G16920
Oryza barthii
OBART06G16920
N
OBART10G08120
Oryza barthii
OBART10G08120
N
OB02G19900
Oryza brachyantha
OB02G19900
N
OB02G35790
Oryza brachyantha
OB02G35790
N
OB02G40170
Oryza brachyantha
OB02G40170
N
OB03G16590
Oryza brachyantha
OB03G16590
N
OB04G30380
Oryza brachyantha
OB04G30380
N
OB05G34990
Oryza brachyantha
OB05G34990
N
OB05G35750
Oryza brachyantha
OB05G35750
N
OB10G16200
Oryza brachyantha
OB10G16200
N
ORGLA02G0100500
Oryza glaberrima
ORGLA02G0100500
N
ORGLA02G0246400
Oryza glaberrima
ORGLA02G0246400
N
ORGLA02G0287300
Oryza glaberrima
ORGLA02G0287300
N
ORGLA03G0062600
Oryza glaberrima
ORGLA03G0062600
N
ORGLA04G0200200
Oryza glaberrima
ORGLA04G0200200
N
ORGLA05G0238800
Oryza glaberrima
ORGLA05G0238800
N
ORGLA05G0246000
Oryza glaberrima
ORGLA05G0246000
N
ORGLA06G0140300
Oryza glaberrima
ORGLA06G0140300
N
ORGLA10G0067600
Oryza glaberrima
ORGLA10G0067600
N
OGLUM02G11060
Oryza glumaepatula
OGLUM02G11060
N
OGLUM02G33770
Oryza glumaepatula
OGLUM02G33770
N
OGLUM03G06480
Oryza glumaepatula
OGLUM03G06480
N
OGLUM04G23410
Oryza glumaepatula
OGLUM04G23410
N
OGLUM05G29000
Oryza glumaepatula
OGLUM05G29000
N
OGLUM05G29710
Oryza glumaepatula
OGLUM05G29710
N
OGLUM06G17990
Oryza glumaepatula
OGLUM06G17990
N
OGLUM10G07850
Oryza glumaepatula
OGLUM10G07850
N
BGIOSGA005582
Oryza indica
BGIOSGA005582
N
BGIOSGA006748
Oryza indica
BGIOSGA006748
N
BGIOSGA008846
Oryza indica
BGIOSGA008846
N
BGIOSGA012015
Oryza indica
BGIOSGA012015
N
BGIOSGA017025
Oryza indica
BGIOSGA017025
N
BGIOSGA017471
Oryza indica
BGIOSGA017471
N
BGIOSGA020491
Oryza indica
BGIOSGA020491
N
BGIOSGA023024
Oryza indica
BGIOSGA023024
N
BGIOSGA032814
Oryza indica
BGIOSGA032814
N
OLONG_001045
Oryza longistaminata
OLONG_001045
N
OLONG_006958
Oryza longistaminata
OLONG_006958
N
OLONG_015104
Oryza longistaminata
OLONG_015104
N
OLONG_028191
Oryza longistaminata
OLONG_028191
N
OMERI02G11850
Oryza meridionalis
OMERI02G11850
N
OMERI02G31750
Oryza meridionalis
OMERI02G31750
N
OMERI03G01350
Oryza meridionalis
OMERI03G01350
N
OMERI03G06350
Oryza meridionalis
OMERI03G06350
N
OMERI05G23490
Oryza meridionalis
OMERI05G23490
N
OMERI06G17780
Oryza meridionalis
OMERI06G17780
N
ONIVA02G06380
Oryza nivara
ONIVA02G06380
N
ONIVA02G12460
Oryza nivara
ONIVA02G12460
N
ONIVA02G35790
Oryza nivara
ONIVA02G35790
N
ONIVA04G03690
Oryza nivara
ONIVA04G03690
N
ONIVA04G22720
Oryza nivara
ONIVA04G22720
N
ONIVA05G29540
Oryza nivara
ONIVA05G29540
N
ONIVA05G30250
Oryza nivara
ONIVA05G30250
N
ONIVA06G19730
Oryza nivara
ONIVA06G19730
N
ONIVA10G07810
Oryza nivara
ONIVA10G07810
N
OPUNC02G09860
Oryza punctata
OPUNC02G09860
N
OPUNC02G26270
Oryza punctata
OPUNC02G26270
N
OPUNC02G30580
Oryza punctata
OPUNC02G30580
N
OPUNC03G06240
Oryza punctata
OPUNC03G06240
N
OPUNC04G21010
Oryza punctata
OPUNC04G21010
N
OPUNC05G25080
Oryza punctata
OPUNC05G25080
N
OPUNC05G25820
Oryza punctata
OPUNC05G25820
N
OPUNC06G15310
Oryza punctata
OPUNC06G15310
N
OPUNC10G07050
Oryza punctata
OPUNC10G07050
N
ORUFI02G11080
Oryza rufipogon
ORUFI02G11080
N
ORUFI02G30170
Oryza rufipogon
ORUFI02G30170
N
ORUFI02G34810
Oryza rufipogon
ORUFI02G34810
N
ORUFI03G06370
Oryza rufipogon
ORUFI03G06370
N
ORUFI04G25160
Oryza rufipogon
ORUFI04G25160
N
ORUFI05G29450
Oryza rufipogon
ORUFI05G29450
N
ORUFI05G30290
Oryza rufipogon
ORUFI05G30290
N
ORUFI06G17910
Oryza rufipogon
ORUFI06G17910
N
ORUFI10G08570
Oryza rufipogon
ORUFI10G08570
N
OS02G0257500
Oryza sativa
OS02G0257500
N
OS02G0691500
Oryza sativa
OS02G0691500
N
OS03G0188400
Oryza sativa
OS03G0188400
N
OS05G0586300
Oryza sativa
OS05G0586300
N
OS05G0597000
Oryza sativa
OS05G0597000
N
OS06G0526100
Oryza sativa
OS06G0526100
N
OS10G0376900
Oryza sativa
OS10G0376900
N
Pavir.Aa00538
Panicum virgatum
Pavir.Aa00538
N
Pavir.Aa02723
Panicum virgatum
Pavir.Aa02723
N
Pavir.Ab01030
Panicum virgatum
Pavir.Ab01030
N
Pavir.Ab02502
Panicum virgatum
Pavir.Ab02502
N
Pavir.Da00918
Panicum virgatum
Pavir.Da00918
N
Pavir.Db01402
Panicum virgatum
Pavir.Db01402
N
Pavir.Db01842
Panicum virgatum
Pavir.Db01842
N
Pavir.Fb01393
Panicum virgatum
Pavir.Fb01393
N
Pavir.Ga00771
Panicum virgatum
Pavir.Ga00771
N
Pavir.Ia02758
Panicum virgatum
Pavir.Ia02758
N
Pavir.Ia03109
Panicum virgatum
Pavir.Ia03109
N
Pavir.Ia04907
Panicum virgatum
Pavir.Ia04907
N
Pavir.Ib02778
Panicum virgatum
Pavir.Ib02778
N
Pavir.J03740
Panicum virgatum
Pavir.J03740
N
Pavir.J04021
Panicum virgatum
Pavir.J04021
N
Pavir.J15346
Panicum virgatum
Pavir.J15346
N
Pavir.J25730
Panicum virgatum
Pavir.J25730
N
Pavir.J40759
Panicum virgatum
Pavir.J40759
N
PDK_20s1314901g001
Phoenix dactylifera
PDK_20s1314901g001
N
POPTR_0008s20720
Populus trichocarpa
POPTR_0008s20720
N
POPTR_0012s01370
Populus trichocarpa
POPTR_0012s01370
N
POPTR_0015s06160
Populus trichocarpa
POPTR_0015s06160
N
Pm002111
Prunus mume
Pm002111
N
PRUPE_ppa020862mg
Prunus persica
PRUPE_ppa020862mg
N
29844.m003312
Ricinus communis
29844.m003312
N
30169.m006534
Ricinus communis
30169.m006534
N
SapurV1A.0022s0230
Salix purpurea
SapurV1A.0022s0230
N
SapurV1A.0377s0010
Salix purpurea
SapurV1A.0377s0010
N
SapurV1A.1043s0040
Salix purpurea
SapurV1A.1043s0040
N
SapurV1A.1227s0030
Salix purpurea
SapurV1A.1227s0030
N
SELMODRAFT_410402
Selaginella moellendorffii
SELMODRAFT_410402
N
SELMODRAFT_451148
Selaginella moellendorffii
SELMODRAFT_451148
N
Si004438m.g
Setaria italica
Si004438m.g
N
Si006640m.g
Setaria italica
Si006640m.g
N
Si007984m.g
Setaria italica
Si007984m.g
N
Si010485m.g
Setaria italica
Si010485m.g
N
Si013925m.g
Setaria italica
Si013925m.g
N
Si017482m.g
Setaria italica
Si017482m.g
N
Si017701m.g
Setaria italica
Si017701m.g
N
Si017715m.g
Setaria italica
Si017715m.g
N
Si021834m.g
Setaria italica
Si021834m.g
N
Si036568m.g
Setaria italica
Si036568m.g
N
Si038653m.g
Setaria italica
Si038653m.g
N
Solyc01g080050.2
Solanum lycopersicum
Solyc01g080050.2
N
Solyc03g007410.2
Solanum lycopersicum
Solyc03g007410.2
N
Sb0012s004780
Sorghum bicolor
Sb0012s004780
N
Sb01g044640
Sorghum bicolor
Sb01g044640
N
Sb04g009390
Sorghum bicolor
Sb04g009390
N
Sb04g027280
Sorghum bicolor
Sb04g027280
N
Sb04g031250
Sorghum bicolor
Sb04g031250
N
Sb09g030060
Sorghum bicolor
Sb09g030060
N
Sb09g030930
Sorghum bicolor
Sb09g030930
N
Sb10g020490
Sorghum bicolor
Sb10g020490
N
TCM_015345
Theobroma cacao
TCM_015345
N
TCM_020520
Theobroma cacao
TCM_020520
N
Traes_2BL_E58521BDF
Triticum aestivum
Traes_2BL_E58521BDF
N
Traes_2BS_EE97B0B15
Triticum aestivum
Traes_2BS_EE97B0B15
N
Traes_4AL_EE88645E2
Triticum aestivum
Traes_4AL_EE88645E2
N
Traes_4BL_A48C29364
Triticum aestivum
Traes_4BL_A48C29364
N
Traes_4DL_A76BE77E4
Triticum aestivum
Traes_4DL_A76BE77E4
N
Traes_6DL_882BC1812
Triticum aestivum
Traes_6DL_882BC1812
N
Traes_7DL_1717A9083
Triticum aestivum
Traes_7DL_1717A9083
N
TRIUR3_09788
Triticum urartu
TRIUR3_09788
N
bHLH071
Vitis vinifera
VIT_02s0012g01450
N
MUTE
Vitis vinifera
VIT_05s0020g02700
N
VIT_07s0191g00240
Vitis vinifera
VIT_07s0191g00240
N
SPCH
Vitis vinifera
VIT_16s0050g02500
N
AC233899.1_FG002
Zea mays
AC233899.1_FG002
N
GRMZM2G008691
Zea mays
GRMZM2G008691
N
GRMZM2G045883
Zea mays
GRMZM2G045883
N
GRMZM2G064638
Zea mays
GRMZM2G064638
N
GRMZM2G085751
Zea mays
GRMZM2G085751
N
GRMZM2G086474
Zea mays
GRMZM2G086474
N
GRMZM2G091003
Zea mays
GRMZM2G091003
N
GRMZM2G111146
Zea mays
GRMZM2G111146
N
GRMZM2G162450
Zea mays
GRMZM2G162450
N
GRMZM2G417164
Zea mays
GRMZM2G417164
N