PGSC0003DMG400022043 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400022043 T043489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.894 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400056685 bHLH 196 244

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK15505.1 Cannabis sativa PK15505.1 D 0.894
Cla017100 Citrullus lanatus Cla017100 I 0.861
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.861
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.861
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.861
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.861
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.882
MDP0000119495 Malus domestica MDP0000119495 I 0.882
MDP0000252899 Malus domestica MDP0000252899 I 0.882
MDP0000782908 Malus domestica MDP0000782908 I 0.861
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.860
mgf018190m Mimulus guttatus mgf018190m I 0.860
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.861
OBART05G06380 Oryza barthii OBART05G06380 I 0.882
OB05G15870 Oryza brachyantha OB05G15870 I 0.882
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.882
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.882
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.882
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.882
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.861
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.882
OS05G0199800 Oryza sativa OS05G0199800 I 0.882
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.882
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.882
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I 0.870
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.860
29912.m005337 Ricinus communis 29912.m005337 I 0.860
Si024546m.g Setaria italica Si024546m.g I 0.882
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I 0.914
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.891
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.861
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.858