POPTR_0003s09200 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0003s09200 T043782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s09200.1 bHLH 99 150
POPTR_0003s09200.2 bHLH 99 150

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32546 Aegilops tauschii F775_32546 N
Bo1g147290 Brassica oleracea Bo1g147290 N
Bo3g061340 Brassica oleracea Bo3g061340 N
Bra001258 Brassica rapa Bra001258 N
Bra029658 Brassica rapa Bra029658 N
Bra040015 Brassica rapa Bra040015 N
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N
Gorai.N001000 Gossypium raimondii Gorai.N001000 N
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N
Lus10027045.g Linum usitatissimum Lus10027045.g N
Lus10025582.g Linum usitatissimum Lus10025582.g N
Lus10025581.g Linum usitatissimum Lus10025581.g N
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N
mgf025428m Mimulus guttatus mgf025428m N
mgf000871m Mimulus guttatus mgf000871m N
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N
OBART04G17310 Oryza barthii OBART04G17310 N
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N
BGIOSGA014805 Oryza indica BGIOSGA014805 N
OLONG_009317 Oryza longistaminata OLONG_009317 N
OMERI04G14610 Oryza meridionalis OMERI04G14610 N
ONIVA04G15620 Oryza nivara ONIVA04G15620 N
OPUNC04G15120 Oryza punctata OPUNC04G15120 N
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N
30005.m001261 Ricinus communis 30005.m001261 N
Si010917m.g Setaria italica Si010917m.g N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N
Sb06g021360 Sorghum bicolor Sb06g021360 N
TCM_002550 Theobroma cacao TCM_002550 N
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N