Solyc11g056650.1 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc11g056650.1 T045146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.857 0.843
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.857 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g056650.1.1 bHLH 373 423

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.846
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.841
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.849
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.857
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.857
BHLH80 Arabidopsis thaliana AT1G35460 D 0.857
BHLH81 Arabidopsis thaliana AT4G09180 I 0.857
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.857
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.857
Bo8g026850 Brassica oleracea Bo8g026850 I 0.857
Bo5g085170 Brassica oleracea Bo5g085170 I 0.870
Bo6g043840 Brassica oleracea Bo6g043840 I 0.857
Bra034421 Brassica rapa Bra034421 I 0.870
Bra028088 Brassica rapa Bra028088 I 0.857
Bra036760 Brassica rapa Bra036760 I 0.857
PK06301.1 Cannabis sativa PK06301.1 I 0.857
PK18038.1 Cannabis sativa PK18038.1 I 0.849
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.857
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.857
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.857
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.857
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.849
Cla017792 Citrullus lanatus Cla017792 I 0.849
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.849
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.857
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.849
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.857
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.849
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.857
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.849
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.857
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.857
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.849
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.849
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.857
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.849
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.849
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.849
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.846
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.857
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.849
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.849
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.849
MDP0000180376 Malus domestica MDP0000180376 I 0.849
MDP0000269890 Malus domestica MDP0000269890 I 0.857
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.849
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.849
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.849
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.846
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.849
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.857
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.843
mgf002701m Mimulus guttatus mgf002701m I 0.857
mgf016734m Mimulus guttatus mgf016734m I 0.849
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.849
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.849
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.849
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.846
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.849
Pm004181 Prunus mume Pm004181 I 0.857
Pm025821 Prunus mume Pm025821 I 0.849
Pm000447 Prunus mume Pm000447 I 0.849
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.849
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.857
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.849
30152.m002405 Ricinus communis 30152.m002405 I 0.846
29216.m000261 Ricinus communis 29216.m000261 I 0.849
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.857
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.857
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.842
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.857
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.849
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.842
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.849
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.846
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.883
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.849
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.857
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.857
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.846
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.883
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I 0.914
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.849
TCM_036484 Theobroma cacao TCM_036484 I 0.857
TCM_024842 Theobroma cacao TCM_024842 I 0.849
TCM_005925 Theobroma cacao TCM_005925 I 0.846
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.857
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.849
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.846