TCM_029711 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_029711 T045406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.882 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY28023 bHLH 80 180
EOY28024 bHLH 80 128

Links

Other bHLH family TFs
Other Theobroma cacao TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.856
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.865
BHLH106 Arabidopsis thaliana AT2G41130 N 0.848
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.848
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.845
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.865
Bo3g035410 Brassica oleracea Bo3g035410 N 0.848
Bo4g012960 Brassica oleracea Bo4g012960 N 0.848
Bo4g112750 Brassica oleracea Bo4g112750 N 0.845
Bo4g190700 Brassica oleracea Bo4g190700 N 0.848
Bra004599 Brassica rapa Bra004599 N 0.848
Bra014672 Brassica rapa Bra014672 N 0.845
Bra016951 Brassica rapa Bra016951 N 0.848
PK20225.1 Cannabis sativa PK20225.1 D 0.882
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.848
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.848
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.848
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.848
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.882
Ca_06386 Cicer arietinum Ca_06386 I 0.861
Cla019977 Citrullus lanatus Cla019977 I 0.867
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.882
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.882
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.867
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.840
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.880
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.848
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.848
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.885
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.882
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.861
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.845
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.845
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.873
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.914
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.885
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.844
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.845
LPERR05G03980 Leersia perrieri LPERR05G03980 N 0.839
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.882
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.882
MDP0000256492 Malus domestica MDP0000256492 N 0.864
MDP0000249969 Malus domestica MDP0000249969 I 0.891
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.912
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.912
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.861
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.844
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.852
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.845
OBART03G11320 Oryza barthii OBART03G11320 I 0.845
OBART05G04450 Oryza barthii OBART05G04450 N 0.839
OB03G21490 Oryza brachyantha OB03G21490 I 0.845
OB01G17480 Oryza brachyantha OB01G17480 I 0.874
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.845
ORGLA05G0041400 Oryza glaberrima ORGLA05G0041400 N 0.839
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.874
OGLUM05G04370 Oryza glumaepatula OGLUM05G04370 N 0.839
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.874
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.845
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.874
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.845
OLONG_015419 Oryza longistaminata OLONG_015419 N 0.839
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.874
OMERI05G04410 Oryza meridionalis OMERI05G04410 N 0.839
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.874
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.845
ONIVA05G04820 Oryza nivara ONIVA05G04820 N 0.839
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.874
OPUNC05G04080 Oryza punctata OPUNC05G04080 N 0.839
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.874
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.845
ORUFI05G04670 Oryza rufipogon ORUFI05G04670 N 0.839
OS01G0218100 Oryza sativa OS01G0218100 I 0.874
OS03G0260600 Oryza sativa OS03G0260600 I 0.845
OS05G0163900 Oryza sativa OS05G0163900 N 0.839
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.885
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.885
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.845
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.864
29900.m001610 Ricinus communis 29900.m001610 I 0.888
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.848
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.864
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.870
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.870
Si002517m.g Setaria italica Si002517m.g I 0.873
Si039730m.g Setaria italica Si039730m.g I 0.845
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.845
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.885
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.848
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.885
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.912
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.885
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.845
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.885