Afo_R010307 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R010307 T046587_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY

RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.914 1.000
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY

RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.914 1.000
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.914 1.000
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB

VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.914 1.000
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.914 1.000
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT

AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.879 0.962
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN

NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.879 0.962
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY

RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.879 0.962
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY

RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.879 0.962
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY

RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.879 0.962
NEUROD1
M09873_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.879 0.962
NEUROD1
M09874_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.879 0.962
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW

WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R010307 bHLH 43 95

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_065800 Acremonium chrysogenum ACRE_065800 N 0.000
A1O7_09309 Cladophialophora yegresii A1O7_09309 I 0.000
NechaG89899 Fusarium solani NechaG89899 N 0.000
MAC_07154 Metarhizium acridum MAC_07154 N 0.000
fgenesh1_pm.sca_1_chr1_3_0000032 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000032 N 0.000
NCU09804 Neurospora crassa NCU09804 N 0.000
SBOR_7563 Sclerotinia borealis SBOR_7563 N 0.000
VHEMI08921 Torrubiella hemipterigena VHEMI08921 N 0.000
VDBG_04863 Verticillium albo atrum VDBG_04863 N 0.000
VDBG_04863 Verticillium alfalfae VDBG_04863 N 0.000