Carubv10001470m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10001470m.g T049327_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001470m bHLH 118 169

Links

Other bHLH family TFs
Other Capsella rubella TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11253 Aegilops tauschii F775_11253 N 0.853
AMTR_s00001p00272070 Amborella trichopoda AMTR_s00001p00272070 N 0.860
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.859
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.842
bHLH071 Arabidopsis lyrata fgenesh2_kg.8__126__AT5G46690.1 N 0.851
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.859
BHLH70 Arabidopsis thaliana AT2G46810 N 0.864
BHLH67 Arabidopsis thaliana AT3G61950 N 0.842
BHLH57 Arabidopsis thaliana AT4G01460 N 0.884
BHLH71 Arabidopsis thaliana AT5G46690 N 0.851
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.859
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.842
Bostr.28243s0066 Boechera stricta Bostr.28243s0066 N 0.851
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N 0.884
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N 0.853
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N 0.853
Bo4g197360 Brassica oleracea Bo4g197360 N 0.864
Bo5g038570 Brassica oleracea Bo5g038570 N 0.859
Bo7g057920 Brassica oleracea Bo7g057920 N 0.859
Bo7g075600 Brassica oleracea Bo7g075600 N 0.851
Bo8g071490 Brassica oleracea Bo8g071490 N 0.859
Bo8g097470 Brassica oleracea Bo8g097470 N 0.842
Bo9g004020 Brassica oleracea Bo9g004020 N 0.884
Bo9g055890 Brassica oleracea Bo9g055890 N 0.840
Bo9g065460 Brassica oleracea Bo9g065460 N 0.851
Bra004505 Brassica rapa Bra004505 N 0.861
Bra007644 Brassica rapa Bra007644 N 0.842
Bra016377 Brassica rapa Bra016377 N 0.859
Bra017533 Brassica rapa Bra017533 N 0.851
Bra025007 Brassica rapa Bra025007 N 0.851
Bra027958 Brassica rapa Bra027958 N 0.840
Bra037414 Brassica rapa Bra037414 N 0.884
Bra040483 Brassica rapa Bra040483 N 0.864
Bra040856 Brassica rapa Bra040856 N 0.859
PK21294.1 Cannabis sativa PK21294.1 N 0.859
PK27921.1 Cannabis sativa PK27921.1 N 0.839
Cagra.0050s0019 Capsella grandiflora Cagra.0050s0019 N 0.864
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.859
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.842
Cagra.0751s0031 Capsella grandiflora Cagra.0751s0031 N 0.851
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N 0.914
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.859
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.842
Carubv10023506m.g Capsella rubella Carubv10023506m.g N 0.864
Carubv10026748m.g Capsella rubella Carubv10026748m.g N 0.851
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.881
Ca_00615 Cicer arietinum Ca_00615 N 0.860
Ca_01453 Cicer arietinum Ca_01453 N 0.839
Cla022458 Citrullus lanatus Cla022458 N 0.859
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.859
Cucsa.254010 Cucumis sativus Cucsa.254010 N 0.860
Thhalv10000961m.g Eutrema salsugineum Thhalv10000961m.g N 0.851
Thhalv10001803m.g Eutrema salsugineum Thhalv10001803m.g N 0.864
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.842
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.859
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N 0.884
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.859
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.859
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N 0.853
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.853
MLOC_45114 Hordeum vulgare MLOC_45114 N 0.853
MLOC_67091 Hordeum vulgare MLOC_67091 N 0.853
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.853
LPERR02G23260 Leersia perrieri LPERR02G23260 N 0.853
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.853
LPERR04G19210 Leersia perrieri LPERR04G19210 N 0.853
LPERR05G23220 Leersia perrieri LPERR05G23220 N 0.863
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.859
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.856
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.856
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.859
cassava39415.m1 Manihot esculenta cassava39415.m1 N 0.866
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.859
MTR_8g024210 Medicago truncatula MTR_8g024210 N 0.866
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N 0.911
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N 0.856
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N 0.856
GSMUA_Achr2G06030_001 Musa acuminata GSMUA_Achr2G06030_001 N 0.856
GSMUA_Achr2G22310_001 Musa acuminata GSMUA_Achr2G22310_001 N 0.883
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.853
GSMUA_Achr7G21110_001 Musa acuminata GSMUA_Achr7G21110_001 N 0.860
GSMUA_Achr7G21190_001 Musa acuminata GSMUA_Achr7G21190_001 N 0.860
GSMUA_Achr8G28400_001 Musa acuminata GSMUA_Achr8G28400_001 N 0.856
OBART02G28630 Oryza barthii OBART02G28630 N 0.853
OBART02G33270 Oryza barthii OBART02G33270 N 0.853
OBART03G06470 Oryza barthii OBART03G06470 N 0.853
OBART04G23490 Oryza barthii OBART04G23490 N 0.853
OBART05G27490 Oryza barthii OBART05G27490 N 0.853
OBART10G08120 Oryza barthii OBART10G08120 N 0.853
OB02G35790 Oryza brachyantha OB02G35790 N 0.853
OB02G40170 Oryza brachyantha OB02G40170 N 0.853
OB03G16590 Oryza brachyantha OB03G16590 N 0.853
OB04G30380 Oryza brachyantha OB04G30380 N 0.853
OB05G34990 Oryza brachyantha OB05G34990 N 0.853
OB10G16200 Oryza brachyantha OB10G16200 N 0.853
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N 0.853
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.853
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.853
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N 0.853
ORGLA05G0238800 Oryza glaberrima ORGLA05G0238800 N 0.853
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.853
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.853
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.853
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N 0.853
OGLUM05G29000 Oryza glumaepatula OGLUM05G29000 N 0.853
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.853
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.853
BGIOSGA008846 Oryza indica BGIOSGA008846 N 0.853
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.853
BGIOSGA017025 Oryza indica BGIOSGA017025 N 0.853
BGIOSGA017471 Oryza indica BGIOSGA017471 N 0.853
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.853
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.853
OLONG_028191 Oryza longistaminata OLONG_028191 N 0.853
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.853
OMERI03G01350 Oryza meridionalis OMERI03G01350 N 0.853
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.853
OMERI05G23490 Oryza meridionalis OMERI05G23490 N 0.853
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.853
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.853
ONIVA04G03690 Oryza nivara ONIVA04G03690 N 0.853
ONIVA04G22720 Oryza nivara ONIVA04G22720 N 0.853
ONIVA05G29540 Oryza nivara ONIVA05G29540 N 0.853
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.853
OPUNC02G26270 Oryza punctata OPUNC02G26270 N 0.853
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.853
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.853
OPUNC04G21010 Oryza punctata OPUNC04G21010 N 0.853
OPUNC05G25080 Oryza punctata OPUNC05G25080 N 0.853
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.853
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N 0.853
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.853
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.853
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N 0.853
ORUFI05G29450 Oryza rufipogon ORUFI05G29450 N 0.853
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.853
OS02G0691500 Oryza sativa OS02G0691500 N 0.853
OS03G0188400 Oryza sativa OS03G0188400 N 0.853
OS05G0586300 Oryza sativa OS05G0586300 N 0.853
OS10G0376900 Oryza sativa OS10G0376900 N 0.853
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.853
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N 0.853
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.856
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N 0.840
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.853
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.853
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.853
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.853
Pavir.J03740 Panicum virgatum Pavir.J03740 N 0.853
Pavir.J04021 Panicum virgatum Pavir.J04021 N 0.853
Pavir.J15346 Panicum virgatum Pavir.J15346 N 0.840
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.853
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N 0.847
Si007984m.g Setaria italica Si007984m.g N 0.852
Si010485m.g Setaria italica Si010485m.g N 0.840
Si017701m.g Setaria italica Si017701m.g N 0.853
Si017715m.g Setaria italica Si017715m.g N 0.853
Si021834m.g Setaria italica Si021834m.g N 0.853
Si036568m.g Setaria italica Si036568m.g N 0.853
Si038653m.g Setaria italica Si038653m.g N 0.853
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.862
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.862
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.853
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.853
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.853
Sb04g031250 Sorghum bicolor Sb04g031250 N 0.853
Sb09g030060 Sorghum bicolor Sb09g030060 N 0.853
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N 0.853
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.853
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.853
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.853
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N 0.853
bHLH071 Vitis vinifera VIT_02s0012g01450 N 0.856
FMA Vitis vinifera VIT_05s0029g00050 N 0.862
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.856
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.853
GRMZM2G006631 Zea mays GRMZM2G006631 N 0.853
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.851
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.853
GRMZM2G086474 Zea mays GRMZM2G086474 N 0.840
GRMZM2G091003 Zea mays GRMZM2G091003 N 0.853
GRMZM2G111146 Zea mays GRMZM2G111146 N 0.853
GRMZM2G162450 Zea mays GRMZM2G162450 N 0.853